Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | P9301_15141 |
Symbol | pyrF |
ID | 4912572 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Prochlorococcus marinus str. MIT 9301 |
Kingdom | Bacteria |
Replicon accession | NC_009091 |
Strand | - |
Start bp | 1281605 |
End bp | 1282333 |
Gene Length | 729 bp |
Protein Length | 242 aa |
Translation table | 11 |
GC content | 30% |
IMG OID | 640161110 |
Product | orotidine 5'-phosphate decarboxylase |
Protein accession | YP_001091738 |
Protein GI | 126696852 |
COG category | [F] Nucleotide transport and metabolism |
COG ID | [COG0284] Orotidine-5'-phosphate decarboxylase |
TIGRFAM ID | [TIGR01740] orotidine 5'-phosphate decarboxylase, subfamily 1 |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.463498 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAATAAAA GATTTAATTC AGAAGATAAA ATAATATTGG CAATTGATGG ATTAGATGTA AGTCAAGCAA AATTACTTCT GGAAAAATGT CCTGATATTA AGTGGGTGAA AATTGGTTTA GAGCTTTTTG TTAGGGAAGG TCCAAGAGTT ATTGAAATAT TAAAAGGTTT AAATAAAAAA ATTTTTTTAG ACTTAAAATT TCATGATATT CCAAATACCA TGCGTGCAGC ATGTTTCCAA GTCTCAAAAT TAGGAGTTGA TATAATCTCT ATTCATTCTT CAGCAGGTCT AAAAGCCCTT AAGGAATCGA AGAAAGCCTC TTTAGAAGGA GCCAAATCAT TAGGTGTTAA GCCTCCATTT GTTGTAGGAA TAACTGTTTT AACAAGCTTT TCTCTTCAAG ATTTTCAAAC TGATCTTGAT AGAAATAATT CAATTGAAGA AAATGTATTG AGACTTGCAA AATTGTCTTT TGATGCTGGA TTAGATGGAT GTGTTTGTTC CCCTTGGGAG GTAAAAATGT TGAGAAATAT TTATAAGAAT AATTTTGAAC TTATTACACC AGGCATTAGA TTAAATATTG ACAGCAAAGA TGATCAAAAT AGAATTATGA CTCCCAATGA AGCTATAGAT AATGGCGCTT CTAAGTTGGT CATTGGTAGA TCAATATCAA AAGCTATAGA TCCTAATAAA GCTCTAATAG AAATATTTAA ATCTATTGAG TCTGATTAA
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Protein sequence | MNKRFNSEDK IILAIDGLDV SQAKLLLEKC PDIKWVKIGL ELFVREGPRV IEILKGLNKK IFLDLKFHDI PNTMRAACFQ VSKLGVDIIS IHSSAGLKAL KESKKASLEG AKSLGVKPPF VVGITVLTSF SLQDFQTDLD RNNSIEENVL RLAKLSFDAG LDGCVCSPWE VKMLRNIYKN NFELITPGIR LNIDSKDDQN RIMTPNEAID NGASKLVIGR SISKAIDPNK ALIEIFKSIE SD
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