| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | P9301_14831 |
|---|
| Symbol | lpd |
|---|
| ID | 4911939 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Prochlorococcus marinus str. MIT 9301 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009091 |
|---|
| Strand | - |
|---|
| Start bp | 1251271 |
|---|
| End bp | 1252710 |
|---|
| Gene Length | 1440 bp |
|---|
| Protein Length | 479 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 36% |
|---|
| IMG OID | 640161075 |
|---|
| Product | dihydrolipoamide dehydrogenase |
|---|
| Protein accession | YP_001091707 |
|---|
| Protein GI | 126696821 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1249] Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 2 |
|---|
| Plasmid unclonability p-value | 0.509805 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGACTGATT CAAGTTTTGA TTTCGATTTA ATTGTAATAG GAGCAGGATA TGGAGGTTTT
GATGCCGCTA AACATGCTGC TGGCAAGGGA CTGAAAGTCG CAATAGTAGA ATCTTCTGAT
ATGGGAGGTA CTTGTGTTAA CAAGGGTTGT GTTCCATCTA AAGCTCTTTT GGCTGCAAGT
GGAAAAGTTA GAGAAATAGC TGATTATGAA CATTTAGCTA AATTTGGTAT TCATGCTTCT
CCAGTAAGGT TCGAGAGATC AAAAATTGCA GATCATGCAA ATAATTTAGT CTTAAATGTT
AGAGAAAATT TAACAAAAAC TCTTAAAAGA AGTGGAGTTG AAATTATTTT GGGAATTGGA
AGAATTGAAG GAAATCAAAA AGTAGGTGTA AGAGATAAAA ACGGAATTGA TAAAATTTTT
ACATGTAAGA ATATTGTTAT AGCAACAGGT TCTTCTCCTT TTGTGCCCCG TGGAATAACT
TTGGATAATA GGACCGTATT CACTAGTGAT GATGCGGTTA AACTTGAGTG GCTTCCAAGA
TGGATAGCAA TTATTGGAAG TGGATATATA GGACTAGAAT TTGCTGATGT TTATACCGCG
CTTGGTTGTG AAGTTACCAT GATCGAGGCT TTGGAAAATA TTATGCCAAC ATTTGATCCA
GACATCACTA AAATTGCTAA GAAGAACCTT ATTCAAGCAA GAGATATAGA TACAAAATCA
AATGTCTTTG CGACAAAAAT AATACCTGGA TGTCCTGTAA AAATAGAACT GACGGATGCA
AAATCTAAGG AAGTTGTAGA AACTTTAGAA GTTGACGCTG TACTAGTTGC TACTGGCAGA
AGTCCTAATA GTAATAACTT AAATCTTGAG TCGGTTGGTA TCGAAACAGT AAAAGGGTTT
ATTCCTATAG ATGATCAGAT GAGAGTTAAG AATGGTGATG AAATAATACC TAACATTTGG
GCCGTTGGAG ATGTAACGGG CAAACTAATG CTTGCCCATA CAGCTGCAGC GCAGGGTACT
GTTGCTGTTG ATAATATTTG CGGTGGTAAT GTCGGAATTA ACTATAAAAG TATACCTGCA
GCAACCTTTA CTCACCCAGA GATAAGTTCA GTTGGTCTCT CAGAAGCTGA AGCTGAGGAG
ATATCTGCAA AAGAAAATTT TACTTTGGGA GTTGTCAAAA GTTTCTTTAA GGCTAATTCA
AAAGCATTGG CTGAATTGGA GAGTGACGGA TTGCTAAAGT TGATTTTCAA CAAAGATAAT
GGGAAAGTAT TAGGTGCTCA TATTTTTGGG TTACATGCAG CTGATTTAAT TCAAGAAATT
TCGAACGCTA TTTCAAGGAA CCAAGATGTA ATTCAATTAT CTAAAGAAGT TCATACTCAT
CCTACTCTTA GTGAAGTAGT TGAGGTCGCA TATAAACAAG CAGCTTCTCA AATAAAATAA
|
|---|
| Protein sequence | MTDSSFDFDL IVIGAGYGGF DAAKHAAGKG LKVAIVESSD MGGTCVNKGC VPSKALLAAS
GKVREIADYE HLAKFGIHAS PVRFERSKIA DHANNLVLNV RENLTKTLKR SGVEIILGIG
RIEGNQKVGV RDKNGIDKIF TCKNIVIATG SSPFVPRGIT LDNRTVFTSD DAVKLEWLPR
WIAIIGSGYI GLEFADVYTA LGCEVTMIEA LENIMPTFDP DITKIAKKNL IQARDIDTKS
NVFATKIIPG CPVKIELTDA KSKEVVETLE VDAVLVATGR SPNSNNLNLE SVGIETVKGF
IPIDDQMRVK NGDEIIPNIW AVGDVTGKLM LAHTAAAQGT VAVDNICGGN VGINYKSIPA
ATFTHPEISS VGLSEAEAEE ISAKENFTLG VVKSFFKANS KALAELESDG LLKLIFNKDN
GKVLGAHIFG LHAADLIQEI SNAISRNQDV IQLSKEVHTH PTLSEVVEVA YKQAASQIK
|
|---|
| |