| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | P9301_14741 |
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| Symbol | |
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| ID | 4911039 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Prochlorococcus marinus str. MIT 9301 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009091 |
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| Strand | - |
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| Start bp | 1242742 |
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| End bp | 1243683 |
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| Gene Length | 942 bp |
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| Protein Length | 313 aa |
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| Translation table | 11 |
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| GC content | 36% |
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| IMG OID | 640161066 |
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| Product | type II alternative sigma-70 family RNA polymerase sigma factor |
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| Protein accession | YP_001091698 |
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| Protein GI | 126696812 |
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| COG category | [K] Transcription |
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| COG ID | [COG0568] DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32) |
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| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family
[TIGR02997] RNA polymerase sigma factor, cyanobacterial RpoD-like family |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATTTCAT CATTACCAAC ACAAGCAGAA CCGCCTAAAA GGAGAAGCAA TGATCCTATT
AGCTGGTATT TGCAAAATAT CGGTAGAGTT CCTTTATTAA CACCTGCCGA GGAGATTGAG
TTGGGTAATC AAGTCCAGAA GATGATGATT CTTACAGAAG ATGGACAATT AAATGAAAAG
ACTAATGAAT TTACAACTCA GCAAAAAAGA ACAATAAAAA TTGGTCGAAG AGCTAAAGAA
AGAATGATGA AAGCTAATTT AAGATTAGTT GTCAGTGTTG CAAAAAAATA TCAAGGTAAA
GGACTGGAAC TTCTTGATTT AGTACAAGAA GGTTCTCTTG GGTTGGAGAG GGCTGTTGAA
AAATTTGATC CGACAAGGGG GTATAAGTTT TCTACATACG CTTTTTGGTG GATTAGACAG
AGTATGACAA GAGCAATTGC TTGTCAATCA AGAACAATTC GTTTACCTGT TCACTTAAGT
GAAAGGTTAG CTTCAATTAG AAAAGTTAGT AGAGATTTGG CTCATAAACT TGGTGCTATG
CCCAGCAGGA TTGAAATTGC AGAGGCTATG GAAATTGATG TAGAAGAATT GGATTCTGTC
TTAAGACAAG CTTTATCGAC AAGTAGTTTA GATGCTCCAG TAAATGGCGA TGACGGCAGA
AGCTTTTTAG GTGATTTAAT TGCTGATAGT AATAATGAAG AACCTTTAGA TCAAGTTGAA
CAAAAAATGC ATCAAGAGCA ACTTGGTAAG TGGTTAAGTC ATTTGAGCGA GCAAGAACAA
CATGTTCTCA AATTAAGATT TGGGCTTGAT GCAAATGAGA GACACACACT TGCTGAAATT
GGAAGATTAT TAGAAGTTTC CAGAGAAAGA GTAAGACAAG TTGAACTTAA GGCGCTAAGA
AAATTAAGGA ATTTAACTAG AAAATTACCT AGCAGTATTT AA
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| Protein sequence | MISSLPTQAE PPKRRSNDPI SWYLQNIGRV PLLTPAEEIE LGNQVQKMMI LTEDGQLNEK
TNEFTTQQKR TIKIGRRAKE RMMKANLRLV VSVAKKYQGK GLELLDLVQE GSLGLERAVE
KFDPTRGYKF STYAFWWIRQ SMTRAIACQS RTIRLPVHLS ERLASIRKVS RDLAHKLGAM
PSRIEIAEAM EIDVEELDSV LRQALSTSSL DAPVNGDDGR SFLGDLIADS NNEEPLDQVE
QKMHQEQLGK WLSHLSEQEQ HVLKLRFGLD ANERHTLAEI GRLLEVSRER VRQVELKALR
KLRNLTRKLP SSI
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