Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | P9301_14651 |
Symbol | trmD |
ID | 4911068 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Prochlorococcus marinus str. MIT 9301 |
Kingdom | Bacteria |
Replicon accession | NC_009091 |
Strand | - |
Start bp | 1232948 |
End bp | 1234168 |
Gene Length | 1221 bp |
Protein Length | 406 aa |
Translation table | 11 |
GC content | 33% |
IMG OID | 640161057 |
Product | putative bifunctional enzyme: tRNA methyltransferase; 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase |
Protein accession | YP_001091689 |
Protein GI | 126696803 |
COG category | [I] Lipid transport and metabolism [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0245] 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [COG0336] tRNA-(guanine-N1)-methyltransferase |
TIGRFAM ID | [TIGR00088] tRNA (guanine-N1)-methyltransferase [TIGR00151] 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGTGGTT TTAATTTTGA TGTAATTACA TTATTCCCTA AAGCTTTTGA ATTGATAAAT AATTTAGGGG TCATAACAAA AGCTCTAGAT AAGAATTTGA TCGATTTAAA TTTACATGAT TTGAGAGAAT ATGGAGAAGG TTCTTACAGA CAAGTAGACG ATAAGCCTTA TGGAGGAGGA GCAGGTATGG TATTAAAACC TGAACCTATT TATAAGGCAT ATGAATCAAT TAGAAAATTA CCCAAAAGTA AAACTTTGCT GATGACCCCA CAGGGTAAAG TACTAAAGCA AAAGGATCTT GCGAGATGGT CCACTTTGGA TCAAATAATA ATTATTTGTG GTCAATATGA AGGTTTTGAT GAAAGGATTA GATGTTTAGC TGATGAAGAG ATATCGATAG GCGATTATGT ACTTTCTGGA GGTGAAATAC CCGCTATATC AATAATTAAT GGTTTGACTA GATTATTACC AGGAACTCTT GGTGATCCAG ATTCCTTAGT AGATGAGAGT CATAATTCTT CTTTATTAGA ATATCCTCAA TACACAAGGC CGATAACTTT TAAAGATATG AAAGTGCCAG ATATTCTAGT GAGCGGTAAT CATGAAGAGA TTAAATCGTG GAGAAGAAGA AAAAGTTTTG AAAGAACATT GGAGAGAAGA AGTGACTTAA TTTCAAATGA AAACTACAAA AAATCCCCAC AAAGTAAGAG AATAATAAAA GAAAATAATC AATTCATGAA ATTTAGAATA GGCAATGGAT ACGATATTCA CAGACTTGTA GAGGATAGAG ATTTAATTAT TGGAGGTGTA AAATTACATC ACCCTGAAAG TTTAGGATTG GATGGGCATA GTGATGCTGA TGTTTTAAGT CACTCAATAA TGGATGCTTT ATTGGGAGCT CTTTCGTTGG GCGACATAGG AAAGTATTTC CCCCCATCTG ATGAAAAATG GAAAAATGCT GATAGCTTGT TTTTGTTATC AAAAGTAATT GACTTAATAA GACAAGATGG TTGGGAAATA AATAATATTG ATAGCGTTCT TGTTGCTGAA AGGCCAAAAA TCATGCCACA TATAAAACTA ATGAAAAAAA ATATTTCTGA AATTTTAAAT ATTGATGAAA ATTTAATTGG GATTAAAGCA ACTACGAATG AAAAATTGGG TCCAGAGGGG AGAGAAGAGG GTATAAGTTG CCATTCAGTA GTTCTTCTTG AAAAAAAATG A
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Protein sequence | MSGFNFDVIT LFPKAFELIN NLGVITKALD KNLIDLNLHD LREYGEGSYR QVDDKPYGGG AGMVLKPEPI YKAYESIRKL PKSKTLLMTP QGKVLKQKDL ARWSTLDQII IICGQYEGFD ERIRCLADEE ISIGDYVLSG GEIPAISIIN GLTRLLPGTL GDPDSLVDES HNSSLLEYPQ YTRPITFKDM KVPDILVSGN HEEIKSWRRR KSFERTLERR SDLISNENYK KSPQSKRIIK ENNQFMKFRI GNGYDIHRLV EDRDLIIGGV KLHHPESLGL DGHSDADVLS HSIMDALLGA LSLGDIGKYF PPSDEKWKNA DSLFLLSKVI DLIRQDGWEI NNIDSVLVAE RPKIMPHIKL MKKNISEILN IDENLIGIKA TTNEKLGPEG REEGISCHSV VLLEKK
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