| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | P9301_13491 |
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| Symbol | psbD |
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| ID | 4912435 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Prochlorococcus marinus str. MIT 9301 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009091 |
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| Strand | + |
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| Start bp | 1126362 |
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| End bp | 1127438 |
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| Gene Length | 1077 bp |
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| Protein Length | 358 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 640160938 |
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| Product | photosystem II PsbD protein (D2) |
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| Protein accession | YP_001091573 |
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| Protein GI | 126696687 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | [TIGR01152] Photosystem II, DII subunit (also called Q(A)) |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACGATCG CAGTTGGTAG CGCCCCACAA AGAGGATGGT TTGATGTCCT CGATGATTGG
TTGAAGCGCG ACCGCTTTGT ATTTATTGGT TGGTCCGGAC TACTTCTACT TCCTTGTGCA
TACCTTGCTA TAGGTGGTTG GTTTGTCGGA ACAACATTTG TTACCTCTTG GTACACACAC
GGAGTTGCAA GTTCATACCT TGAAGGTTGT AACTTCTTAA CAGCAGCTGT AAGCACCCCT
GGTGATGCCA TGGGACACAG TCTTCTATTT TTATGGGGTC CTGAAGCCCA AGGTAGTTTC
GTAAGATGGC TACAACTTGG TGGTCTTTGG AACTTCGTTG CATTACATGG AGTATTTGGC
CTAATTGGTT TTATGCTTCG TCAGTTTGAA ATTGCTGGCC TTGTTGGAAT TAGACCATAC
AACGCACTAG CTTTCTCAGC AGTAATTGCA GTATTCACAA GTATTTTCCT TATTTATCCT
TTAGGACAGC ATAGTTGGTT CTTCGCACCT TCATTCGGTG TTGCAGCAAT CTTCCGTTAC
ATCCTATTCA TTCAAGGTTT TCACAATATC ACTTTAAACC CATTCCATAT GATGGGAGTT
GCTGGAATTC TTGGTGGTGC TCTACTTTGC GCTATTCATG GAGCTACAGT TCAAAATACT
TTGTATGAAG ATACAAGTAT TTACACAGAT GGTAAGGTTC AAAGTTCAAC ATTTAGAGCT
TTTGATCCAA CTCAAGAAGA AGAAACCTAT TCAATGATTA CAGCGAATAG ATTTTGGAGT
CAAATCTTCG GTATTGCTTT CTCAAACAAG CGTTTCTTAC ATTTCTTGAT GCTATTTGTA
CCTGTTATGG GTATGTGGAC ATCTTCTATT GGTATTGTCG GCTTAGCACT AAACTTGAGA
GCTTATGACT TCGTAAGCCA AGAAATTCGT GCAGCAGAAG ATCCAGAATT TGAAACTTTC
TATACAAAAA ATATACTTTT GAACGAAGGT ATGCGAGCAT GGATGTCTTC TGTGGATCAA
CCACACGAAA ACTTTGTATT CCCTGAGGAG GTTCTTCCAC GTGGAAACGC CCTTTAA
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| Protein sequence | MTIAVGSAPQ RGWFDVLDDW LKRDRFVFIG WSGLLLLPCA YLAIGGWFVG TTFVTSWYTH
GVASSYLEGC NFLTAAVSTP GDAMGHSLLF LWGPEAQGSF VRWLQLGGLW NFVALHGVFG
LIGFMLRQFE IAGLVGIRPY NALAFSAVIA VFTSIFLIYP LGQHSWFFAP SFGVAAIFRY
ILFIQGFHNI TLNPFHMMGV AGILGGALLC AIHGATVQNT LYEDTSIYTD GKVQSSTFRA
FDPTQEEETY SMITANRFWS QIFGIAFSNK RFLHFLMLFV PVMGMWTSSI GIVGLALNLR
AYDFVSQEIR AAEDPEFETF YTKNILLNEG MRAWMSSVDQ PHENFVFPEE VLPRGNAL
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