| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | P9301_12081 |
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| Symbol | srmB |
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| ID | 4911510 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Prochlorococcus marinus str. MIT 9301 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009091 |
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| Strand | - |
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| Start bp | 1021486 |
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| End bp | 1023267 |
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| Gene Length | 1782 bp |
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| Protein Length | 593 aa |
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| Translation table | 11 |
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| GC content | 30% |
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| IMG OID | 640160795 |
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| Product | putative ATP-dependent RNA helicase |
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| Protein accession | YP_001091432 |
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| Protein GI | 126696546 |
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| COG category | [J] Translation, ribosomal structure and biogenesis
[K] Transcription
[L] Replication, recombination and repair |
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| COG ID | [COG0513] Superfamily II DNA and RNA helicases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCTTTTA AAAAAGATAG TAACTCTCTT GGTAGTGAGC AGGAAAACTC TCAGAATGAC
GATTCTTCTC TACTAGAGTT CAAGAACTTA GATAACAAAA AAGAAATTGA ATCTCAACTA
TTGGAAGTAT CTAAGGGAGA AGATAATGAC AATGGATTTC TCGAATTTGG GTTTAATCAA
TCGATCTTAA ACTCGTTAAT AAATAAAGGA TATAAAAATC CAACTCCCAT CCAAAAAGCT
GCAATTCCCG AACTAATGTT AGGCAGGGAT TTATTAGGCC AAGCACAAAC AGGAACAGGA
AAGACTGCAG CTTTCGCATT ACCATTAATA GAAAAACTTA CAGATAATAA AGAATTAAAT
GCCAAGGTTT TAGTTATGAC TCCTACAAGA GAATTAGCAA CTCAAGTGGC AGAATCCTTT
AAAAGTTATA GTTCTGAATC TAGTAATTTT AAGACGGTTG CAATATATGG AGGTACCGAC
TATCGAAATC AAATTTCTGC ATTAAAAAGA AAAGTTGACG TAGTAGTTGG GACCCCAGGC
CGAATAATGG ATCATATAAG GCAGGGTACT TTTAAAATTA AAGATATAAA TTGTCTTGTT
TTAGATGAGG CAGATGAAAT GTTAAATATG GGTTTTCTTG AAGATATTGA ATGGATAATA
GATCAACTTC CGGAAAATAA GCAGATGGTA TTGTTTTCAG CAACAATGCC TAATGAGATA
AGAAATATAG CAAAAAAATA TCTAAATGAT CCCGCCGAAA TATTAATCAA AAGTGTCAAA
AAAGAAACTC AATTAATTTC TCAAAAATTT CTATATGTTC AAAGACATCA TAAGTTAGAT
GCTTTAAAAA GAATACTAGA ACTTAATAAC GAGGGAGTAA TTATTTTTGT TAGGACAAAA
CTACTTACTA CTTCAATCGC TGAAGCTTTA GAGAATTCAG GTCATACTGT GGCAGTACTT
AATGGAGATA TACCTCAAAA TCAAAGAGAA AATACTGTAG ATAGATTGAA AAAAGGATTT
ATTAATATTC TTGTTGCAAC TGATGTCGCA GCTAGGGGAT TAGATGTTGA GAGGATAAAA
CTTGTTGTTA ATTACGATTT TCCTTTTGAC AAGGAAACAT ATACTCATAG AATTGGAAGA
ACTGGAAGGG CAGGCAGATC AGGAGAAGCA ATTTTATTCG TTAATCTAAG AGAAAAACAT
TTTCTAAGAA ACTTAGAAAA TTCAACAAGA ACCAAGATTG AAGAAATTAA TATACCAAGT
AATAAAATAA TAAATGAAAA AAGGATGGAG AAACTTATAG ATAGTTTTAA TGAGAGTTCT
TTAGCTAAAG ATGAAAATGA AGAAAATAAA GCTTTGATTA TTGATGTACT AGATAATTTA
AAAGAAAAAT ACTCTATGGA TGACTCAAAT ATTGCAATGG CGGCTATTAA TTTAGTAATA
GGTAATAAAT CATTTTTTGT TAATGACGAT GATTCTTGGA TTAATAAACA AAATAATACT
GATCGAAATA GATCAAATAG AAATAATAAT AACCGTATGA GAAATTCAAG TAGAAGAAAT
AATTATCAAA ATGATTCTTT TGAAACCTAC AAATTTAACT TTGGTAAATT TGATGGAGTT
AGAGTTGCAA ATATTATATC CTCAATCTGT AATTCAACTA ATATAAATGG TAGATCCATA
GGTAAGATAC AGATTTTTAA TGATTACAGT TTGGTAGATT TACCAAGAGA TCTGCATAGA
GAAACTAAAA ATAAATTAAA AAAAATTAAA GTAAGAAACT AG
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| Protein sequence | MAFKKDSNSL GSEQENSQND DSSLLEFKNL DNKKEIESQL LEVSKGEDND NGFLEFGFNQ
SILNSLINKG YKNPTPIQKA AIPELMLGRD LLGQAQTGTG KTAAFALPLI EKLTDNKELN
AKVLVMTPTR ELATQVAESF KSYSSESSNF KTVAIYGGTD YRNQISALKR KVDVVVGTPG
RIMDHIRQGT FKIKDINCLV LDEADEMLNM GFLEDIEWII DQLPENKQMV LFSATMPNEI
RNIAKKYLND PAEILIKSVK KETQLISQKF LYVQRHHKLD ALKRILELNN EGVIIFVRTK
LLTTSIAEAL ENSGHTVAVL NGDIPQNQRE NTVDRLKKGF INILVATDVA ARGLDVERIK
LVVNYDFPFD KETYTHRIGR TGRAGRSGEA ILFVNLREKH FLRNLENSTR TKIEEINIPS
NKIINEKRME KLIDSFNESS LAKDENEENK ALIIDVLDNL KEKYSMDDSN IAMAAINLVI
GNKSFFVNDD DSWINKQNNT DRNRSNRNNN NRMRNSSRRN NYQNDSFETY KFNFGKFDGV
RVANIISSIC NSTNINGRSI GKIQIFNDYS LVDLPRDLHR ETKNKLKKIK VRN
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