Gene P9301_11951 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagP9301_11951 
SymbolclpC 
ID4911696 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProchlorococcus marinus str. MIT 9301 
KingdomBacteria 
Replicon accessionNC_009091 
Strand
Start bp1008419 
End bp1010944 
Gene Length2526 bp 
Protein Length841 aa 
Translation table11 
GC content36% 
IMG OID640160782 
ProductClpC 
Protein accessionYP_001091419 
Protein GI126696533 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0542] ATPases with chaperone activity, ATP-binding subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTCGAAA GATTTACAGA AAAGGCTATA AAAGTCATTA TGCTTGCTCA AGAGGAAGCT 
CGAAGACTTG GTCATAATTT TGTTGGAACT GAACAAATTC TTTTGGGGTT AATTGGAGAA
GGAACTGGGG TAGCAGCAAA AGTACTTAAA TCACTTGGAG TCAATTTAAA AGATTCAAGG
ATAGAGGTGG AAAAGATAAT TGGTAGAGGT TCAGGATTTG TAGCTGTAGA AATACCTTTT
ACTCCCAGAG CTAAAAGAGT TTTGGAACTA TCTTTGGAAG AGGCTCGTCA ACTTGGCCAC
AATTACATTG GTACAGAACA TTTATTGTTA GGTTTAATAA GAGAAGGTGA AGGTGTGGCT
GCAAGAGTTC TTGAAAATCT TAATATTGAC CTCACAAAAG TTAGAACTCA AGTTATAAGG
ATGCTTGGTG AAACCGCCGA AGTTGGCACC GGGGGTAGCT CAAACAAGGG CAACTTAAAA
ACTGCTACCC TTGATGAATT CGGAACAAAT TTAACAAAAT TAGCAAGTGA ATCAAAATTA
GATCCAGTCG TTGGTCGCCA TTCAGAAATA GATCGTGTCG TTCAAATACT AGGTAGGAGG
ACAAAAAATA ATCCTGTTCT TATTGGGGAG CCAGGTGTAG GTAAAACAGC TATCGCAGAA
GGTTTAGCTC AAAGAATACA AACTGGCGAT ATTCCAGACA TACTTGAAGA TAAAAGAGTT
TTGACCCTTG ATATAGGTCT TTTGGTAGCA GGAACAAAAT ATAGAGGTGA ATTTGAAGAA
AGGTTAAAAA AAATTATGGA AGAAATTAAA TCAGCGGGTA ACGTCATTCT TGTCATAGAT
GAAGTGCATA CTTTAATTGG TGCTGGAGCT GCTGAAGGAG CTATAGATGC AGCAAATATA
CTTAAGCCAG CATTAGCTAG AGGGGAACTT CAATGTATTG GAGCAACAAC TCTAGACGAA
TATAGAAAAC ATATTGAAAG AGATGCTGCT TTAGAAAGAA GATTCCAGCC TGTAATGGTT
GGGGAACCAT CCATAGAAGA TACAATCGAA ATTTTAAAAG GTCTCAGAGA GCGTTACGAA
CAACATCATC GACTAAAAAT TACTGATGAT GCCCTAGAGG CCGCCGCTCA TTTAGGTGAT
CGTTACATAT CTGATAGGTT TTTACCTGAT AAGGCTATTG ACCTTATCGA TGAGGCTGGA
AGTAGGGTGC GTTTAATAAA CTCTAAACTT CCGCCTGAAG CAAAACAAAT AGATAGAGAA
TTAAGACAAA TCCAAAAACA GAAGGAAGAA TCTGTAAGAG ACCAAAATTT TGATCAGGCT
GGGCAATTAC GCGAAAAAGA GATGGAATTG TCTGCAAAAA TTAAAGAGGT TTTGGATAAT
AAGAAAGAAT CTACAGCTGT AGATCAAACT GATCCTGATA ATTCTGCAAA AAGTGATTCT
AAACTTTTAC AAAGTCCTCT TGTCAGTGAA GAGGATGTAG CTCATATTGT GGCTTCATGG
ACAGGTGTTC CTGTTCAAAA ATTAACAGAA ACAGAATCAG TCAAGCTTCT CAATATGGAG
GAAACACTTC ACCAAAGACT GATTGGACAA GATGAAGCTG TAAAGGCTGT GTCAAGAGCT
ATAAGAAGAG CAAGAGTTGG ATTAAAAAAT CCTAATAGAC CCATAGCAAG TTTTATCTTT
TCTGGACCTA CTGGTGTTGG TAAAACTGAA TTGACTAAAT CATTGGCTTC ATATTTCTTC
GGTAGTGAAG AAGCAATGAT CAGATTAGAT ATGTCAGAAT TCATGGAAAG ACATACAGTT
AGTAAACTTA TAGGCTCTCC TCCTGGCTAT GTTGGTTTTA ATGAAGGTGG TCAGCTTACT
GAAGCTGTTA GAAGACGCCC TTACACCGTT GTTTTATTTG ATGAAGTTGA AAAGGCGCAT
CCAGATGTTT TTAACTTATT ATTGCAACTA CTTGAAGACG GAAGATTAAC TGACTCCAAA
GGGAGAACTG TAGATTTTAA AAATACATTA TTAATAATGA CCTCTAATAT CGGTTCAAAA
GTTATCGAAA AAGGTGGTGG TGGACTAGGT TTTGAATTCT CAGGTGATTC AGTTGAAGAT
AGCCAATATA ATAGAATTAA ATCACTAGTT AATGAAGAAC TTAAGCAATA CTTTAGGCCT
GAATTTTTAA ATAGACTTGA TGAAATAATT GTATTTAGAC AATTAACTAA AAATGAAGTT
AAAGAAATTG CTGAAATAAT GTTGCAAGAA GTTTTTATCC GACTACAAGA TAAAGGTATT
AAATTAAATG TCACCGATGC TTTTAAAGAA AGACTTGTTG AAGAAGGTTA CAATCCTTCA
TACGGAGCGA GACCTTTAAG AAGGGCAGTT ATGCGTTTAC TAGAAGATAG TTTGGCTGAA
GAAGTTCTTT CTGGAAGAAT TAAAGACGGA GATAATGCTT TAGTTGATAT AGATGATAAT
AAAAAAGTTA CTATAAATAT TTCTTCTGAA GAATCTTCTC AAGAGCTAGC AGGTGCTAAC
TTCTAA
 
Protein sequence
MFERFTEKAI KVIMLAQEEA RRLGHNFVGT EQILLGLIGE GTGVAAKVLK SLGVNLKDSR 
IEVEKIIGRG SGFVAVEIPF TPRAKRVLEL SLEEARQLGH NYIGTEHLLL GLIREGEGVA
ARVLENLNID LTKVRTQVIR MLGETAEVGT GGSSNKGNLK TATLDEFGTN LTKLASESKL
DPVVGRHSEI DRVVQILGRR TKNNPVLIGE PGVGKTAIAE GLAQRIQTGD IPDILEDKRV
LTLDIGLLVA GTKYRGEFEE RLKKIMEEIK SAGNVILVID EVHTLIGAGA AEGAIDAANI
LKPALARGEL QCIGATTLDE YRKHIERDAA LERRFQPVMV GEPSIEDTIE ILKGLRERYE
QHHRLKITDD ALEAAAHLGD RYISDRFLPD KAIDLIDEAG SRVRLINSKL PPEAKQIDRE
LRQIQKQKEE SVRDQNFDQA GQLREKEMEL SAKIKEVLDN KKESTAVDQT DPDNSAKSDS
KLLQSPLVSE EDVAHIVASW TGVPVQKLTE TESVKLLNME ETLHQRLIGQ DEAVKAVSRA
IRRARVGLKN PNRPIASFIF SGPTGVGKTE LTKSLASYFF GSEEAMIRLD MSEFMERHTV
SKLIGSPPGY VGFNEGGQLT EAVRRRPYTV VLFDEVEKAH PDVFNLLLQL LEDGRLTDSK
GRTVDFKNTL LIMTSNIGSK VIEKGGGGLG FEFSGDSVED SQYNRIKSLV NEELKQYFRP
EFLNRLDEII VFRQLTKNEV KEIAEIMLQE VFIRLQDKGI KLNVTDAFKE RLVEEGYNPS
YGARPLRRAV MRLLEDSLAE EVLSGRIKDG DNALVDIDDN KKVTINISSE ESSQELAGAN
F