| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | P9301_11921 |
|---|
| Symbol | cdsA |
|---|
| ID | 4911890 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Prochlorococcus marinus str. MIT 9301 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009091 |
|---|
| Strand | + |
|---|
| Start bp | 1005534 |
|---|
| End bp | 1006391 |
|---|
| Gene Length | 858 bp |
|---|
| Protein Length | 285 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 31% |
|---|
| IMG OID | 640160779 |
|---|
| Product | phosphatidate cytidylyltransferase |
|---|
| Protein accession | YP_001091416 |
|---|
| Protein GI | 126696530 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG0575] CDP-diglyceride synthetase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.664589 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGATTTA AAAGCGGATT ACTAATAGGA ATTTTTGGTT TAATTGTTGT TTTGTTGGGG
GGATGGTTTT TTACCTTGGC AACTGCGTTG CTTACATATT TAGCATTATT AGAATTTTTT
AGAATGGCAG AATTTAAAGG AATAAGACCA GCTACAAAAA CCACATTATT TTCGTCGTTT
ATTATTATAG TTTCTACTTA TCTTGAGACC ATTGGTGTGC TTGAAGGAGA AATTTCAAAT
TCAATTTTGC CAATCTGTTC AGTTGGGATA TGCACTTGGT TACTTTTGCA ACCAAAATCT
GGGACAATTT CAGATATTGC AGCATCTATT TTTGGATTAT TCTATTTAGG TTTTTTACCT
AGTTACTGGA TTAAGTTGAG GGGATTAGAT TCAGTGATAA TAAGTTCAAA TCAGAGTATT
ATGTCGTTTG AGAACTTATC AAATACCACA GGTCTTCATT TAACTTTAAC TTCTTGTTTT
TTAATTGTAG CTAGTGATAT TGGTTCTTAT TTCATTGGGA AGTCATTTGG TAAAACATCT
CTATCTCCAA TATCTCCGAG CAAAACTATA GAAGGTTTAA TTGGAGGAAT ATCCTGTTCA
ATTTTACTAG CAATATTTTT CGCATTTTTA ATGAATTGGG AAAATCCATT AATTGTTGGA
ATAATTTATG GAATTTCAAT TTCTCTTATG GCATTAGTTG GAGATTTAAT AGAATCTATG
ATGAAGAGAG ATGCAAAAAT AAAAGATTCC GGAACTTTTT TACCGGGACA TGGAGGGATT
CTTGACAGAA TTGACAGTTA CATCTTTACT CCATCTGTTT TGTATTACTT TTTTATAATT
CTCAAATATC TAAATTAA
|
|---|
| Protein sequence | MRFKSGLLIG IFGLIVVLLG GWFFTLATAL LTYLALLEFF RMAEFKGIRP ATKTTLFSSF
IIIVSTYLET IGVLEGEISN SILPICSVGI CTWLLLQPKS GTISDIAASI FGLFYLGFLP
SYWIKLRGLD SVIISSNQSI MSFENLSNTT GLHLTLTSCF LIVASDIGSY FIGKSFGKTS
LSPISPSKTI EGLIGGISCS ILLAIFFAFL MNWENPLIVG IIYGISISLM ALVGDLIESM
MKRDAKIKDS GTFLPGHGGI LDRIDSYIFT PSVLYYFFII LKYLN
|
|---|
| |