| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | P9301_11551 |
|---|
| Symbol | ddpA |
|---|
| ID | 4912038 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Prochlorococcus marinus str. MIT 9301 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009091 |
|---|
| Strand | - |
|---|
| Start bp | 968408 |
|---|
| End bp | 969979 |
|---|
| Gene Length | 1572 bp |
|---|
| Protein Length | 523 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 30% |
|---|
| IMG OID | 640160741 |
|---|
| Product | ABC transporter substrate-binding protein |
|---|
| Protein accession | YP_001091379 |
|---|
| Protein GI | 126696493 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0747] ABC-type dipeptide transport system, periplasmic component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 2 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAAAAAA AAATTGTTTT ATCAATATTT ATAATTTTAA TTTCTTTTTT ACAGAATTCT
TGCGGCTCAA AAAGAATATC TAAAAAAATT ATAGTAGCAA GTTCTGGAAA AATTGAATCT
TTAGATCCAG CTAGAGCAAA TACTCTTAAA GCAATTCAAT TAATCAGTTC TCTTGGAGAC
ACATTATATG AATTAAATTC TAAGGGAGAA TTAATACCTG AATTGGCCTC GGGGATGCCA
GTTATTTCAA AGGATAGACT TCAAATAACT ATCAATTTAA GAAAGAATGT TTTTTTTCAC
GATGGAACTG CTTTTAACTC AAATGCTATG AAGTTTACCT TTGATAGATT CAAAAGAATT
GGAACTATGA ACTACATTTT AGGAAATAAG ATTAAATCAA TAGAAACGCC AAGTGAATAT
TCAGTCATAA TAAATTTGAA TAAACCATCA AGTTCTTTAA ATGGTTTACT CACATCAGTA
AATTTAACTC CAATATCCCC TACATTTTAC AAACAATATT CTGATAAGTT TCTAAATGAA
AAATTTGTTG GTACTGGCAA GTATGTGCTG ACCAGTTTTT CTAATGAAGT TCAATCAATT
GATCCATATT TGAATTATTG GGGTGAAAAG CCCTTCAATA ACGGCGTTAA TTTTGTGGGC
TATTCAAATT CATCCTCTCT TTTTGGGGCT TTAAAAAGTA AACAAATTGA CGTGCTTTTA
TCAAATTCAA TTGATGATAG TCAGAGAAAA AGTTTAAATG ATTTAAGCAA AAATAAACAG
TTTAATGAAG GTAATAGCCC TTTCACTGAA TTAAGTTTTA TAAGCCTCAA AACTAGTTCT
TATCCCTTAA GTAATCTTAA TTTAAGATTG GCTTTGGCAA AAAGTCTTAA TAGAAAATTG
ATTAGTGAGA AAGTAAGTTA TGGATTAAGG AAGCCATCTA GATCAATTAT TCCTCCGATA
TTAAAAAAAG ATAATCAAGA ACTGTGGCCT AAATATGATT ATTTAGAAGC AAGAAGGTTA
TTGCAAAAAG AAAATTATTG CAATGGAAAT ATTCTAAAAA TACCCCTTAC TTATAGATCT
AATGTACCAG CTGACAAGCT TATTGCTCTG ACATGGCAAG AAGAAATTAA AAATTCTTTG
AAAGATTGTA TTGATATTGA ACTCAATGGG GTTGAATCTA CAACAGTTTA TAAGAATCTA
AGTTTAGGAA TTTATACGGC AGTCCTTCTC GATTGGACTG GGGCTTATTC AGATCCAGAG
GCTTATCTTA CCCCTCTTTT AAGTTGTAAT GAAATAGTTG ACGGCATATG TAAAAAAGGA
GAATCAGTTT ATAGCGGGAG TTTTTGGGGA TCTAATAAAG TGGAAAGTTT ATTTCTTGAG
AGTGAAAAAA TAAGTGGAAT TAAAAGATTA GAAAAACTTG TTGAAATTGA AAAAATAGCA
GCAAGTTCAA TACCTTATAT TCCTATTTGG ATCTCCTCTC AAAAAGCATG GTCACAAAAT
AAAATATCAA AACCTATTTT TAATGGCGCA GGAATAATTT CATTGAGTAA TCTTGAGTTA
ATTAATGAGT AG
|
|---|
| Protein sequence | MKKKIVLSIF IILISFLQNS CGSKRISKKI IVASSGKIES LDPARANTLK AIQLISSLGD
TLYELNSKGE LIPELASGMP VISKDRLQIT INLRKNVFFH DGTAFNSNAM KFTFDRFKRI
GTMNYILGNK IKSIETPSEY SVIINLNKPS SSLNGLLTSV NLTPISPTFY KQYSDKFLNE
KFVGTGKYVL TSFSNEVQSI DPYLNYWGEK PFNNGVNFVG YSNSSSLFGA LKSKQIDVLL
SNSIDDSQRK SLNDLSKNKQ FNEGNSPFTE LSFISLKTSS YPLSNLNLRL ALAKSLNRKL
ISEKVSYGLR KPSRSIIPPI LKKDNQELWP KYDYLEARRL LQKENYCNGN ILKIPLTYRS
NVPADKLIAL TWQEEIKNSL KDCIDIELNG VESTTVYKNL SLGIYTAVLL DWTGAYSDPE
AYLTPLLSCN EIVDGICKKG ESVYSGSFWG SNKVESLFLE SEKISGIKRL EKLVEIEKIA
ASSIPYIPIW ISSQKAWSQN KISKPIFNGA GIISLSNLEL INE
|
|---|
| |