Gene P9301_11341 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagP9301_11341 
SymbollraI 
ID4912187 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProchlorococcus marinus str. MIT 9301 
KingdomBacteria 
Replicon accessionNC_009091 
Strand
Start bp952569 
End bp954110 
Gene Length1542 bp 
Protein Length513 aa 
Translation table11 
GC content35% 
IMG OID640160720 
ProductABC transporter substrate-binding protein 
Protein accessionYP_001091358 
Protein GI126696472 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0803] ABC-type metal ion transport system, periplasmic component/surface adhesin 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.472786 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCAATTT TTAAAAGACT TTTAACAAAT AAAAAAGGTG CGAGTAAGTC AATTATTAAA 
AATTCCGTAA TCGCAGGAAC AATTATATTT TCTGGTTTTG GGCAGGATGT TATGGCTAAA
GGAAAGTCAT ATGTAGCAGT AGAACCACTA GTTTGTGATT TAGTTAAATC AATTGCATTA
CCGTCTGACG AAGTTACATG CTTAGTAGAT AGAAAACAAG ATGTTCATGA CTTAAAGATC
AATCCAAGGC AAGCTAAATT ACTAAATAGC GCAGACAAAG TATTTACTCT TGGTAGAGAA
ATGACGCCAA GTATGAGAAA TTGGGAAAAT AAAAAGAATA CTGTTGTTGT AGGTGTTAGT
GCAATAGACG TAGATGATCA TTCTGATCAT GGAGGTCATG ATGATCACTC AGACCATGGT
GGACATGACG ATCATTCTAA ACATTCCGCT AAAGTAGATG ATCATTCTGA TCATGGAGGT
CATGATGATC ACTCAGACCA TGGTGGACAT GATGATCATG CTGAAGGTGC TTTCGAATGG
GCAGGCAAAT TTCAACTTTC TAAGGGTTCT TACAAATGGT CATTTGAAAA AGTAGATGGC
GAATATGCAG ATCCTGCAAT GAAGATGGTG ATTCTCAAAT CTAATGACAT AGAAGGGTCT
GAAGATTTAG CTAAAGAATT ATTAGGATCT AAAGACTCAA TAAGCAGAAA AAATGATGGT
ACTTTGATAG CAAGTAATAA AGCTTTTGTT CTTAACTTTG ATCAAAAAAA AGAAAGTACT
GTTTTTAACG TGGATATCAA AGAAGATGGT CAATATATAT TTTTTACTGA ACACATGCCT
TTTGAGTTTG AAGCAACTCA ACACTTTTTT AAAGACGTTT CAAATAGTGA TGTAGAACCA
ATAGCACAAG TTCCAGACGA AGGTGAGGGG CATCATCATC ATGACCATGG AGGTCTAGAT
CCACATGTAT GGCATGATCC GCATAACATC ATAAAAATGG GAGATCTTAT AAGCAAAAGT
TTAAAGAAAG ATATTTCAGT TTTTAATAGA GGTGACAGAA AACTAATTAA TGAAAGATTC
GAAAAAGCTG ATTCTCTCTT AGAAGACTTA GATAGTTGGA TCGTCGAACA AGTAAGTTCT
ATTCCTGAGG AAAACAGAGT AATTGTCTCT AAACACAAAG CAATGGAATA CTACGGGGAT
GCATTTGGTT TTGAAACCAT TAGTTTACTT GACTTTCTTG GAGACTCCTC AAGCTTAAGG
CCAGACAACA TAAGTTCTAC TTTAAAAATG TTAGATGAAG AGAAAGTTCA GGCAATATTT
CCTGAACAAA TTCCAGCATC TAAGTTATTA AGGAACTTAA GTAGACAAAG TTCAGTTCCT
TTAGCTTCTA ATCAAATATT CGTTGATGGA TTGATGATGG ATGGTAATAC GGTTTCAGTA
GCTGTTCACA ATACTTGTAC AATTGTTGAT TCATTAGGTG GAAGCTGTGA TAAAGAATCT
GGCTCCAATC TTGAGTCTGA ATGGTACAAA CTTTCAGATT AA
 
Protein sequence
MSIFKRLLTN KKGASKSIIK NSVIAGTIIF SGFGQDVMAK GKSYVAVEPL VCDLVKSIAL 
PSDEVTCLVD RKQDVHDLKI NPRQAKLLNS ADKVFTLGRE MTPSMRNWEN KKNTVVVGVS
AIDVDDHSDH GGHDDHSDHG GHDDHSKHSA KVDDHSDHGG HDDHSDHGGH DDHAEGAFEW
AGKFQLSKGS YKWSFEKVDG EYADPAMKMV ILKSNDIEGS EDLAKELLGS KDSISRKNDG
TLIASNKAFV LNFDQKKEST VFNVDIKEDG QYIFFTEHMP FEFEATQHFF KDVSNSDVEP
IAQVPDEGEG HHHHDHGGLD PHVWHDPHNI IKMGDLISKS LKKDISVFNR GDRKLINERF
EKADSLLEDL DSWIVEQVSS IPEENRVIVS KHKAMEYYGD AFGFETISLL DFLGDSSSLR
PDNISSTLKM LDEEKVQAIF PEQIPASKLL RNLSRQSSVP LASNQIFVDG LMMDGNTVSV
AVHNTCTIVD SLGGSCDKES GSNLESEWYK LSD