Gene P9301_09981 details

Gene Information

• Locus tag: P9301_09981
• Symbol: cspR
• ID: 4911256
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Prochlorococcus marinus str. MIT 9301
• Kingdom: Bacteria
• Replicon accession: NC_009091
• Strand: +
• Start bp: 868731
• End bp: 869213
• Gene Length: 483 bp
• Protein Length: 160 aa
• Translation table: 11
• GC content: 30%
• IMG OID: 640160582
• Product: SpoU family tRNA/rRNA methyltransferase
• Protein accession: YP_001091222
• Protein GI: 126696336
• COG category: [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG0219] Predicted rRNA methylase (SpoU class)
• TIGRFAM ID: [TIGR00185] rRNA methylase, putative, group 2

Plasmid Coverage information

• Num covering plasmid clones: 9
• Plasmid unclonability p-value: 0.582415
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

TTGGAAGTCG CTCTTTTTGA ACCTAGAATA CCACAAAATA CTGGTAATAT TGCCAGATCA 
TGTGCTGCGT TTGATATACC TTTAAATCTT ATAGAGCCCC TGGGCTTTAA ACTAGAAGAT 
AAATATTTAA AAAGAGCAGG ATTAGACTAT TGGCCTTTAG TTACTGTTAA TAGGTATGAG 
AATTTTGAAA AATTTATGAC GGCAAAAACA ACAAAAAGAA TAATTTCTTT TAGTAAAAAA 
AATGGATTAT ATTTGAAGGA TTTTAAATTT AAGCAAGATG ATATTTTGCT ATTTGGGAGA 
GAAGATTCAG GATTACCCGA TTCAATTATT GATAAAAGCG ACTTTTTAAT ATCAATATTT 
ATGCCGAATA TACAGACTGG AAACAATGAT CAAAAAGGTG TTAGAAGTCT AAACCTTTCT 
GTAGCATGCG GAATTGCTAT ATATGAGGCC CACAAACAAA TAAATTTTCA AAATGGTAAT 
TAA 

 

Protein sequence

MEVALFEPRI PQNTGNIARS CAAFDIPLNL IEPLGFKLED KYLKRAGLDY WPLVTVNRYE 
NFEKFMTAKT TKRIISFSKK NGLYLKDFKF KQDDILLFGR EDSGLPDSII DKSDFLISIF 
MPNIQTGNND QKGVRSLNLS VACGIAIYEA HKQINFQNGN