Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | P9301_09461 |
Symbol | salY |
ID | 4911746 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Prochlorococcus marinus str. MIT 9301 |
Kingdom | Bacteria |
Replicon accession | NC_009091 |
Strand | - |
Start bp | 814329 |
End bp | 815561 |
Gene Length | 1233 bp |
Protein Length | 410 aa |
Translation table | 11 |
GC content | 33% |
IMG OID | 640160529 |
Product | putative ABC transporter |
Protein accession | YP_001091170 |
Protein GI | 126696284 |
COG category | [V] Defense mechanisms |
COG ID | [COG0577] ABC-type antimicrobial peptide transport system, permease component |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGTCTAGGA ATATTTCAAT AAAAGAAGCC TTAGGCATGG CAACAAAAAC TTTAGTTTCG AACAAATTGA GAAGTTCGTT AACAATGCTT GGGATAATTA TAGGAAATGC CTCAGTTATT ACACTTGTTG GACTTGGTAG AGGTGCTCAA ACATTAGCAA AGAACCAATT AAGTAATTTA GGTGCCAATG TTTTATTTAT CGTTCCAGGA AATAATGACA CAAGAAGAAG GGGTATTTCA TTTCCTAAAA ACCTAGTTTT AGAAGATGCA ATAGCAATAA GCAACCAAGT ACCAACAGTT AAAAAAGTAG CTCCTCAAAT CTCTGCTAAC GAAATAGTGC AATCAAATTC TAAAAGTTTA AATATATCAA TTGCTGGTGT TACTCCTGAA TTTCTTGAAG TAAGAAGCTT TGAAGTTGAT AAGGGTAGAT TTCTATCAAA AAGTGATGTT AATAGTGCAA GAAGTTATGT TGTGATAGGT CCTGATCTTA AAGATGAATT TTTCAAAGAT AAATCTTCAT CACTTGGAAA AAAAATCAGA ATTAAAGACC ATACTTATGA AATTATCGGA ATATTAAAAC CCAAAGGTGC TGTATTTGGA AGTAATCAAG ACAAAAATGC TTATATTCCA TTAACCACAA TGGTCAATAG GATTACAGGA AAGGACCCGA CATATGGAGT AAGTTTAAGC TTCATAAGTG TTGAAGCGAT AAATAAAAAT GCAACTAGTG CTGCTAAATT TCAGATTACT AATTTATTAA GGCAAAGACA TAAAATAATA AGAGATGATG ACTTTGCGGT TAGATCGCAA GAAGATGCGC TGAATATAGT AACCAACATA ACAAGTGGAT TAACGTTTTT ATTGGCTGGT ATTGGTGCAG TATCTTTAGT GGTTGGAGGC ATAGGAATCA TGAATATTAT GCTAGTTTCT GTAAGCGAAA GGACTGAAGA GATTGGACTT AGAAAAGCAA TAGGAGCTAA ACAGTCAGAT ATATTAATTC AATTTTTAAT TGAGGCATTG ATTTTATCTA CAATTGGAGG ATTAATTGGA ACAACAACTG GATTATCAGG TGTTTTTCTT TTATCTCTGA TAACACCTCT TCCTGCATCG GTAGGAATTA CAACTACTTT TTCCACCATG ATCATTTCAG GATCAATAGG TTTAATCTTT GGCGTTTTAC CTGCAAAAAG AGCTTCTAAA TTAGATCCAA TTGTTGCATT AAGAAGTTTA TAA
|
Protein sequence | MSRNISIKEA LGMATKTLVS NKLRSSLTML GIIIGNASVI TLVGLGRGAQ TLAKNQLSNL GANVLFIVPG NNDTRRRGIS FPKNLVLEDA IAISNQVPTV KKVAPQISAN EIVQSNSKSL NISIAGVTPE FLEVRSFEVD KGRFLSKSDV NSARSYVVIG PDLKDEFFKD KSSSLGKKIR IKDHTYEIIG ILKPKGAVFG SNQDKNAYIP LTTMVNRITG KDPTYGVSLS FISVEAINKN ATSAAKFQIT NLLRQRHKII RDDDFAVRSQ EDALNIVTNI TSGLTFLLAG IGAVSLVVGG IGIMNIMLVS VSERTEEIGL RKAIGAKQSD ILIQFLIEAL ILSTIGGLIG TTTGLSGVFL LSLITPLPAS VGITTTFSTM IISGSIGLIF GVLPAKRASK LDPIVALRSL
|
| |