Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | P9301_09291 |
Symbol | secD |
ID | 4912282 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Prochlorococcus marinus str. MIT 9301 |
Kingdom | Bacteria |
Replicon accession | NC_009091 |
Strand | + |
Start bp | 799139 |
End bp | 800602 |
Gene Length | 1464 bp |
Protein Length | 487 aa |
Translation table | 11 |
GC content | 31% |
IMG OID | 640160512 |
Product | preprotein translocase subunit SecD |
Protein accession | YP_001091153 |
Protein GI | 126696267 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG0342] Preprotein translocase subunit SecD |
TIGRFAM ID | [TIGR00916] protein-export membrane protein, SecD/SecF family [TIGR01129] protein-export membrane protein SecD |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAAAAA GGCAAGGCTG GCTTTTTTTT ATTATATTTC TACTTACTTT ATCTGTTTAT CTATTAATAA ATTATCCTTT ACAGTTGGGA TTGGATCTAC AAGGGGGTTC TCAACTTACA CTACAAATTA TTAAAGATGA AGGTAAGGTA ACAACGGATG AACTTGAGGC AGTTAATTCG GTTATAGATA AGCGCGTTAA CAATTTAGGA GTTTCTGAGT CTAATTTGCA GACCCTCGGT GGAGATCAAT TGATTTTAGA ATTGCCAGGT GAACAAAATC CATTAGTTGC TTCAAGAGTA TTAGGTAAGA CTGCTTTATT AGAATTTAGA ACTCAAAAAG AAGGAACATC TACAGATTTA AAAATCCTGC AAGTACAGAG ATTGAGTATT AAAGATTTAA TGGAACAATA TTCCTTTGCA AAAAATAGTC AAAATGAGGA TAATTTCTTA AATGTTATTA AAGATGATCT TAAAAAGATA GAGCAAGAAT TGAATTACTC ATCTACTAGT AATGATTTAT ATGGGAAGTT AATTGAAATC AAAAAATATG TTGATAACGA AATTACAAAT TTATTTATTA AAACAGATTT ATCAGGTAAG GATCTTATTA ACGTAGGAAG GAGACAAGAA CAAACAAATA GTAATTGGGA GGTTTTATTA ACTTTTAGTA ATTCAGGAGG TGAAAAGTTT GCAGAAATTA CAAAGTCAAT TGCTGGTACT AATCAACTAT TAGCTATCAT TCTAGATGGT GAATCAATAA GTGAAGCCAG TGTTGGTATG CAGTTTGCTA GTACTGGGAT TACAGGTGGA TCAGCAACAA TAAGCGGTAA TTTTAGTGCT GAAAATGCTA GAGAATTAGA AGTTCAACTT AAAGGAGGCT CATTGCCATT GCCAATTGAA ATAGTAGAAA CTAACACAAT AGGGGCTCTG TTGGGATCCA AAAATATTTT AAAAAGTCTT TATGCAGCTA TTAGTGGGTT AATTTTTGTT GGTATTTTTA TGATTTTTAA TTATAGAATT CTAGGTTTTG TTTCAGTTCT TTCTCTAGTA CTTTATGGTT TCTTTAATTT AGCCATATAT TCTCTAATTC CTGTAACTTT GACCTTGCCG GGAATATCTG GGCTTATACT AAGTATTGGT ATGGCTGTTG ATGCAAATAT TCTAATATTT GAGAGGATTA GAGAAGAATT ATATGAAGGC AATACTCTAA CAAGATCTAT TGATAGCGGT TTTCAGAGAG CTAATTCATC CATAGTTGAT GGCCATATTA CAACTCTTCT TAGTTGTTTT GTATTGTTTT TATTAGGAAC AAATTTTGTT AAGGGTTTTG CAGCAACATT AGGTATTGGA GTCTTAATTA GCTTGTTTAC CTCATTAAAT TGTTCTAAGA CTATTTTGCG ATTTTTTACA ACATATCAAT CTTTAAGGCA AAAAAATCTC TATCTACCCA AGAATAATTT TTAA
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Protein sequence | MKKRQGWLFF IIFLLTLSVY LLINYPLQLG LDLQGGSQLT LQIIKDEGKV TTDELEAVNS VIDKRVNNLG VSESNLQTLG GDQLILELPG EQNPLVASRV LGKTALLEFR TQKEGTSTDL KILQVQRLSI KDLMEQYSFA KNSQNEDNFL NVIKDDLKKI EQELNYSSTS NDLYGKLIEI KKYVDNEITN LFIKTDLSGK DLINVGRRQE QTNSNWEVLL TFSNSGGEKF AEITKSIAGT NQLLAIILDG ESISEASVGM QFASTGITGG SATISGNFSA ENARELEVQL KGGSLPLPIE IVETNTIGAL LGSKNILKSL YAAISGLIFV GIFMIFNYRI LGFVSVLSLV LYGFFNLAIY SLIPVTLTLP GISGLILSIG MAVDANILIF ERIREELYEG NTLTRSIDSG FQRANSSIVD GHITTLLSCF VLFLLGTNFV KGFAATLGIG VLISLFTSLN CSKTILRFFT TYQSLRQKNL YLPKNNF
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