Gene P9301_09291 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagP9301_09291 
SymbolsecD 
ID4912282 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProchlorococcus marinus str. MIT 9301 
KingdomBacteria 
Replicon accessionNC_009091 
Strand
Start bp799139 
End bp800602 
Gene Length1464 bp 
Protein Length487 aa 
Translation table11 
GC content31% 
IMG OID640160512 
Productpreprotein translocase subunit SecD 
Protein accessionYP_001091153 
Protein GI126696267 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG0342] Preprotein translocase subunit SecD 
TIGRFAM ID[TIGR00916] protein-export membrane protein, SecD/SecF family
[TIGR01129] protein-export membrane protein SecD 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAAAAA GGCAAGGCTG GCTTTTTTTT ATTATATTTC TACTTACTTT ATCTGTTTAT 
CTATTAATAA ATTATCCTTT ACAGTTGGGA TTGGATCTAC AAGGGGGTTC TCAACTTACA
CTACAAATTA TTAAAGATGA AGGTAAGGTA ACAACGGATG AACTTGAGGC AGTTAATTCG
GTTATAGATA AGCGCGTTAA CAATTTAGGA GTTTCTGAGT CTAATTTGCA GACCCTCGGT
GGAGATCAAT TGATTTTAGA ATTGCCAGGT GAACAAAATC CATTAGTTGC TTCAAGAGTA
TTAGGTAAGA CTGCTTTATT AGAATTTAGA ACTCAAAAAG AAGGAACATC TACAGATTTA
AAAATCCTGC AAGTACAGAG ATTGAGTATT AAAGATTTAA TGGAACAATA TTCCTTTGCA
AAAAATAGTC AAAATGAGGA TAATTTCTTA AATGTTATTA AAGATGATCT TAAAAAGATA
GAGCAAGAAT TGAATTACTC ATCTACTAGT AATGATTTAT ATGGGAAGTT AATTGAAATC
AAAAAATATG TTGATAACGA AATTACAAAT TTATTTATTA AAACAGATTT ATCAGGTAAG
GATCTTATTA ACGTAGGAAG GAGACAAGAA CAAACAAATA GTAATTGGGA GGTTTTATTA
ACTTTTAGTA ATTCAGGAGG TGAAAAGTTT GCAGAAATTA CAAAGTCAAT TGCTGGTACT
AATCAACTAT TAGCTATCAT TCTAGATGGT GAATCAATAA GTGAAGCCAG TGTTGGTATG
CAGTTTGCTA GTACTGGGAT TACAGGTGGA TCAGCAACAA TAAGCGGTAA TTTTAGTGCT
GAAAATGCTA GAGAATTAGA AGTTCAACTT AAAGGAGGCT CATTGCCATT GCCAATTGAA
ATAGTAGAAA CTAACACAAT AGGGGCTCTG TTGGGATCCA AAAATATTTT AAAAAGTCTT
TATGCAGCTA TTAGTGGGTT AATTTTTGTT GGTATTTTTA TGATTTTTAA TTATAGAATT
CTAGGTTTTG TTTCAGTTCT TTCTCTAGTA CTTTATGGTT TCTTTAATTT AGCCATATAT
TCTCTAATTC CTGTAACTTT GACCTTGCCG GGAATATCTG GGCTTATACT AAGTATTGGT
ATGGCTGTTG ATGCAAATAT TCTAATATTT GAGAGGATTA GAGAAGAATT ATATGAAGGC
AATACTCTAA CAAGATCTAT TGATAGCGGT TTTCAGAGAG CTAATTCATC CATAGTTGAT
GGCCATATTA CAACTCTTCT TAGTTGTTTT GTATTGTTTT TATTAGGAAC AAATTTTGTT
AAGGGTTTTG CAGCAACATT AGGTATTGGA GTCTTAATTA GCTTGTTTAC CTCATTAAAT
TGTTCTAAGA CTATTTTGCG ATTTTTTACA ACATATCAAT CTTTAAGGCA AAAAAATCTC
TATCTACCCA AGAATAATTT TTAA
 
Protein sequence
MKKRQGWLFF IIFLLTLSVY LLINYPLQLG LDLQGGSQLT LQIIKDEGKV TTDELEAVNS 
VIDKRVNNLG VSESNLQTLG GDQLILELPG EQNPLVASRV LGKTALLEFR TQKEGTSTDL
KILQVQRLSI KDLMEQYSFA KNSQNEDNFL NVIKDDLKKI EQELNYSSTS NDLYGKLIEI
KKYVDNEITN LFIKTDLSGK DLINVGRRQE QTNSNWEVLL TFSNSGGEKF AEITKSIAGT
NQLLAIILDG ESISEASVGM QFASTGITGG SATISGNFSA ENARELEVQL KGGSLPLPIE
IVETNTIGAL LGSKNILKSL YAAISGLIFV GIFMIFNYRI LGFVSVLSLV LYGFFNLAIY
SLIPVTLTLP GISGLILSIG MAVDANILIF ERIREELYEG NTLTRSIDSG FQRANSSIVD
GHITTLLSCF VLFLLGTNFV KGFAATLGIG VLISLFTSLN CSKTILRFFT TYQSLRQKNL
YLPKNNF