| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | P9301_09221 |
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| Symbol | umuD |
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| ID | 4912310 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Prochlorococcus marinus str. MIT 9301 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009091 |
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| Strand | - |
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| Start bp | 794536 |
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| End bp | 794952 |
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| Gene Length | 417 bp |
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| Protein Length | 138 aa |
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| Translation table | 11 |
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| GC content | 28% |
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| IMG OID | 640160505 |
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| Product | putative SOS mutagenesis protein UmuD |
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| Protein accession | YP_001091146 |
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| Protein GI | 126696260 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG1974] SOS-response transcriptional repressors (RecA-mediated autopeptidases) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.00588824 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | TTGGATTATT TTGATTCAAC TACTAAAAAA TTTAAAATCC CCTTATTAAC TGATTCGGTA
TCAGCAGGGT TTCCTTCTCC TGCAGATGAC TATGAAGAAG AAAATATTGA TTTAAACGAA
CATTTAATAT CTAATCCGTT TAGCACTTTT TTTCTTAGAG TTAAAGGTGA CTCAATGGTA
AATGCAGGAA TTAAAGATAA AGATTTAATA ATAGTAGACA AGAGCTTAAC AGCCAGGCCA
GGGAATATCA TCATTGCAAT GATAGACGGA GAATTTACAA TAAAAAGATT ATCTATAAAA
AATAATGAAT TATATTTAAA AGCAGAAAAT CATAATTATC CTGATTTTAG ATTTAAAAAC
CATATTGATG TACAGATATG GGGAGTTGTT ATTTATTCAA TACATAGCTA TTTATGA
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| Protein sequence | MDYFDSTTKK FKIPLLTDSV SAGFPSPADD YEEENIDLNE HLISNPFSTF FLRVKGDSMV
NAGIKDKDLI IVDKSLTARP GNIIIAMIDG EFTIKRLSIK NNELYLKAEN HNYPDFRFKN
HIDVQIWGVV IYSIHSYL
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