| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | P9301_09101 |
|---|
| Symbol | |
|---|
| ID | 4912318 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Prochlorococcus marinus str. MIT 9301 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009091 |
|---|
| Strand | + |
|---|
| Start bp | 781489 |
|---|
| End bp | 782493 |
|---|
| Gene Length | 1005 bp |
|---|
| Protein Length | 334 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 33% |
|---|
| IMG OID | 640160493 |
|---|
| Product | RNA methyltransferase TrmH, group 3 |
|---|
| Protein accession | YP_001091134 |
|---|
| Protein GI | 126696248 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0566] rRNA methylases |
|---|
| TIGRFAM ID | [TIGR00186] rRNA methylase, putative, group 3 |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAAAACT CCTCAAATAA ATTTCGCGGA AGAAATATTA AAGAGTACAA AAAAAATTCA
GATTTTAGCT ATTACTCAAA AAATACAAAT CGTTCAGAAA AAAATGATAA ATTTTTGAAC
AAGTACGCTA ACAATAAGAA AGTAGAAAAT TTAAGTAAAA ATAAAGAATC TAATACTTTT
TCGTCTTTTA AAAGAAGAAA TACAAAATTT AAATCCAATA CAGAATTTTC TAATAAAAAT
TCTGATATCC ATCAAGAGTT TACTAACAAA AGAAATTTTG ATGATTGGAT ATGGGGTAAA
CATTCGGTTT ATGAGACTCT CAGTAGTGAT AGAGCTATTA ATAGGATTTG GTGTACTTCG
GAAATTTTTT CTTCAGATAA ATTCTATATT TTGCTTAAGG ATCTTAAATC AAAAGGAGTT
CTTATTGAAG AAGTTTCTTG GAATAGGCTT TCGCAATTGA CATGTGGTGC TTCACATCAA
GGTGTTGCAT TGCAGTTAGC ATGCTCTAAA ACAATACCTC TTGAACAATT AATCTATTTT
TCTAAACACA ATTGTCCAAA TCCTATAATC GTCGCATTTG ATGGTATAAC CGATCCTCAT
AATGTTGGCG CGATAATAAG ATCAGCTGAG GCATTTGATT GCAAGGGTGT AATTATTCCT
CAAAGAAGGT CTGCAGGATT GACTGGAACA GTCGCCAAGG TAGCTGCAGG AGCCTTAGAA
CACCTTCATG TAAGTAGAGT TGTCAACTTA AACAGAGCAC TTGAGGAACT TAAGAAAAAT
GGTTTTCTTG TTGTTGGCTT ATCTGGCGAT GGTCAAATAT CTATTTCAAA TTTTCAAGAA
AAAGCACCTT TGGTAGTTGT AGTTGGCTCT GAAGATAAAG GTATTTCTTT GCTTACTCAA
AAAAAATGCG ATTATATATT AAGCATTCCT CTTAAAGGCA AGACTTCAAG TTTAAATGCC
TCCGTGGCAG CCGCCATTTC GCTATATCAT TTGACAGGTA AATAA
|
|---|
| Protein sequence | MKNSSNKFRG RNIKEYKKNS DFSYYSKNTN RSEKNDKFLN KYANNKKVEN LSKNKESNTF
SSFKRRNTKF KSNTEFSNKN SDIHQEFTNK RNFDDWIWGK HSVYETLSSD RAINRIWCTS
EIFSSDKFYI LLKDLKSKGV LIEEVSWNRL SQLTCGASHQ GVALQLACSK TIPLEQLIYF
SKHNCPNPII VAFDGITDPH NVGAIIRSAE AFDCKGVIIP QRRSAGLTGT VAKVAAGALE
HLHVSRVVNL NRALEELKKN GFLVVGLSGD GQISISNFQE KAPLVVVVGS EDKGISLLTQ
KKCDYILSIP LKGKTSSLNA SVAAAISLYH LTGK
|
|---|
| |