Gene P9301_08221 details

Gene Information

• Locus tag: P9301_08221
• Symbol: typA
• ID: 4911564
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Prochlorococcus marinus str. MIT 9301
• Kingdom: Bacteria
• Replicon accession: NC_009091
• Strand: +
• Start bp: 712663
• End bp: 714459
• Gene Length: 1797 bp
• Protein Length: 598 aa
• Translation table: 11
• GC content: 36%
• IMG OID: 640160404
• Product: tyrosine binding protein
• Protein accession: YP_001091046
• Protein GI: 126696160
• COG category: [T] Signal transduction mechanisms
• COG ID: [COG1217] Predicted membrane GTPase involved in stress response
• TIGRFAM ID: [TIGR00231] small GTP-binding protein domain; [TIGR00485] translation elongation factor TU; [TIGR01394] GTP-binding protein TypA/BipA

Plasmid Coverage information

• Num covering plasmid clones: 0
• Plasmid unclonability p-value: 0.848748
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTCATCTT CGATAAAAGA AATTAGAAAT GTTGCAATTA TTGCTCACGT AGATCATGGC 
AAGACAACGC TTGTAGATGC ATTGTTATCT CAATCAGGAA TATTTAGAGA CAATGAAGTT 
ATCCCTACAT GTGTAATGGA TTCAAACGAT CTTGAAAGAG AAAGGGGGAT AACAATTCTC 
TCAAAAAATA CTGCAGTTAA CTATAAAGAT ACCAGAATTA ATATTATAGA TACACCTGGA 
CATGCTGATT TTGGAGGAGA AGTTGAGAGG GTTTTGGGAA TGGTTGATGG TTGTCTGCTT 
ATTGTTGATG CAAATGAGGG ACCTATGCCT CAAACAAGAT TTGTTTTAAA AAAAGCATTA 
GAAAAAGGAC TTAGGCCTAT AGTCTTTGTA AATAAAATTG ATAGACCACG AGTAGTGCCA 
GAACTAGCAA TTGATAAGGT CCTTGATTTG TTTTTGGAAT TAGGAGCTGA TGATGATCAA 
TGTGATTTTC CTTATCTTTT TGGGAGTGGC TTATCTGGTT TCGCAAAAGA AGAGATGGAA 
TCTAATAGTG ACAATATGAT GCCTCTTTTT GAAGCTATTA TAAGACATGT TCCTCCTCCA 
GTAGGTGACT CTAATAAGCC TCTTCAGCTA CAAATAACTA CCTTGGACTA TTCTGATTTC 
TTGGGCAGAA TAGTAATTGG AAAGATCCAC AATGGAACTA TAAAAAATGG CCAACAGGCT 
AGTTTAATTA AAGAAAACGG AAAAACTATT AAAGGTAAGG TTAGTAAGCT TTTAGGATTT 
GAAGGATTAC AAAGAATTGA TATAAATGAA GCATTTGCAG GAGATATTGT TGCTGTTTCT 
GGTTTTGATG ACGTCAATAT TGGTGAGACC ATAGCATGTC CCGATTCTCC TCATCCTCTC 
CCATTAATCA AAGTTGATGA ACCTACCTTA AATATGACTT TTGTTGTCAA TGATTCACCA 
TTCGCGGGAA AGGAAGGGAA ATTTGTTACC AGTAGACAAT TAAAAAATAG ATTGGAGAGG 
GAACTTCTAA CAAATGTTGC CCTAAGAGTA GAAGAAACTG ATTCTCCTGA CAGGTTCTCA 
GTTTCAGGAA GAGGAGAATT ACATCTAGGG ATATTGATTG AAACCATGAG AAGAGAGGGT 
TTTGAGTTCC AAATATCACA ACCTCAAGTA ATTTTCAGAG AAATTGATAA CGTTGAATGT 
GAGCCTATAG AGACTTTGGT TTTAGATGTG CCTGAAGTAT CTGTTGGTTC TTGCATCGAA 
AAACTTGGAT CTAGAAAGGC AGAGATGAAA AACATGCAGA CAAGTTCAGA TGGTAGAACT 
CAATTAGAAT TTCTTGTTCC ATCAAGAGGA TTAATCGGAT TTCGTGGGGA ATTTGTAAGG 
ATAACCAGAG GTGAAGGCAT CATGAGCCAC TCATTTTATG AATATAAACC TAAAACAGGA 
GATTTTGAAA CCAGGAGAAA CGGAGTCCTT ATAGCTTTTG AAGAAGGTGT TGCCACATTT 
TATGCATTAA AGAATGCTGA AGATAGGGGA GTCTATTTCA TTAAACCTGG AGTCAAAGTT 
TATAAGGGGA TGATAATTGG AGAGAATAAT CGACCGCAAG ATCTTGAGTT GAATATATGT 
AAAACTAAGC AGTTGACTAA TATGAGGTCT GCAGGAGCAG AAGAACTTGA TACTTTGCAG 
TCACCTGTTG ATATTACCCT TGAAAGAGCA CTCGAATATA TTGGTCCAGA TGAAATGCTA 
GAGGTAACAC CAGATTCAAT AAGAATGAGA AAAATTAATA AAAAGAAAAA AAATTAA 

 

Protein sequence

MSSSIKEIRN VAIIAHVDHG KTTLVDALLS QSGIFRDNEV IPTCVMDSND LERERGITIL 
SKNTAVNYKD TRINIIDTPG HADFGGEVER VLGMVDGCLL IVDANEGPMP QTRFVLKKAL 
EKGLRPIVFV NKIDRPRVVP ELAIDKVLDL FLELGADDDQ CDFPYLFGSG LSGFAKEEME 
SNSDNMMPLF EAIIRHVPPP VGDSNKPLQL QITTLDYSDF LGRIVIGKIH NGTIKNGQQA 
SLIKENGKTI KGKVSKLLGF EGLQRIDINE AFAGDIVAVS GFDDVNIGET IACPDSPHPL 
PLIKVDEPTL NMTFVVNDSP FAGKEGKFVT SRQLKNRLER ELLTNVALRV EETDSPDRFS 
VSGRGELHLG ILIETMRREG FEFQISQPQV IFREIDNVEC EPIETLVLDV PEVSVGSCIE 
KLGSRKAEMK NMQTSSDGRT QLEFLVPSRG LIGFRGEFVR ITRGEGIMSH SFYEYKPKTG 
DFETRRNGVL IAFEEGVATF YALKNAEDRG VYFIKPGVKV YKGMIIGENN RPQDLELNIC 
KTKQLTNMRS AGAEELDTLQ SPVDITLERA LEYIGPDEML EVTPDSIRMR KINKKKKN