| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | P9301_07291 |
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| Symbol | ispG |
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| ID | 4912536 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Prochlorococcus marinus str. MIT 9301 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009091 |
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| Strand | + |
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| Start bp | 648590 |
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| End bp | 649807 |
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| Gene Length | 1218 bp |
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| Protein Length | 405 aa |
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| Translation table | 11 |
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| GC content | 36% |
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| IMG OID | 640160311 |
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| Product | 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase |
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| Protein accession | YP_001090953 |
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| Protein GI | 126696067 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG0821] Enzyme involved in the deoxyxylulose pathway of isoprenoid biosynthesis |
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| TIGRFAM ID | [TIGR00612] 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.772299 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCATTAA CTCAATCAAA AGAGGTTAAT AGTCTCTCCA AAAGATATTC AACTCATATT
GAGAGAAGGA TAACTAGAAC AGTAATGGTG GGTGATGTAG CTATTGGAAG TGATTATCCA
GTAAGAGTTC AATCGATGAT AAATGAAGAT ACAATGGATG TCGAAAATGC TTACTTAGCT
ATCAAAAGAC TTCATGATGT GGGTTGTGAA ATTGTAAGGT TAACTGTTCC TTCCTTAGCA
CATGCCAAAG CAGTAGGAGA TATAAAGGCA AAATTATTAG AAAATAATAT CAACACCCCC
TTGGTGGCCG ATGTTCACCA TAATGGTATG AAAATTGCAA TGGAAGTTGC AAAACATGTT
GATAAAGTAA GAATTAATCC TGGATTGTTT GTTTTTGAAA AATCAGACCC TGCTAGAACT
GAATATACAG ATGAGGAATT TGAAACTATT AAGCAAACAA TACTTAAAAG ATTTACCCCT
TTAGTTGAAG TTTTAAAGGC TGAGAACAAA GCTCTAAGGA TTGGAGTTAA TCATGGGTCT
CTATCTGAGA GGATGCTTTT TACTTATGGA GATACGCCAT TAGGAATGAC AGAATCTGCG
ATGGAGTTCG TCAAAATATG TGATGAGCTT GATTTTCATA ACATAATTAT TTCTATGAAA
GCTTCTAGGG CTCCTGTTAT GATGGCAGCT TATAGAATGA TTGCAGATAG GCTTGACTCA
GAAGGATATA ACTATCCCTT ACATTTGGGA GTGACCGAAG CTGGTGATGG TGATTATGGA
AGGATTAAAA GTACTGCTGG AATTGGAACG CTTTTAGCAG AGGGATTAGG AGATACCATC
AGGGTTTCCT TAACAGAAGC TCCAGAAAAG GAAATACCAG TGTGCTATTC AATTTTGCAA
TCTTTAGGAT TAAGAAAAAC AATGGTTGAA TATATCAGTT GCCCTAGTTG TGGTAGAACA
CTTTTCAATC TAGAAGAAGT TGTAGATAAA GTTAGGACCG CCACCTCACA TTTAACGGGT
CTAGATATAG CAATAATGGG ATGTATTGTT AATGGGCCAG GAGAAATGGC AGATGCTGAT
TATGGTTATG TTGGAAAAGG TAAAGGAACT ATTGCCTTAT ATAGAAGGAA AGAAGAGATA
AAAAGAGTAC CTGAAGATGA GGGGGTTAAT GCTTTAATCC AACTTATTAA GGATGATGGG
AAGTGGATTG ATCCTTAA
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| Protein sequence | MSLTQSKEVN SLSKRYSTHI ERRITRTVMV GDVAIGSDYP VRVQSMINED TMDVENAYLA
IKRLHDVGCE IVRLTVPSLA HAKAVGDIKA KLLENNINTP LVADVHHNGM KIAMEVAKHV
DKVRINPGLF VFEKSDPART EYTDEEFETI KQTILKRFTP LVEVLKAENK ALRIGVNHGS
LSERMLFTYG DTPLGMTESA MEFVKICDEL DFHNIIISMK ASRAPVMMAA YRMIADRLDS
EGYNYPLHLG VTEAGDGDYG RIKSTAGIGT LLAEGLGDTI RVSLTEAPEK EIPVCYSILQ
SLGLRKTMVE YISCPSCGRT LFNLEEVVDK VRTATSHLTG LDIAIMGCIV NGPGEMADAD
YGYVGKGKGT IALYRRKEEI KRVPEDEGVN ALIQLIKDDG KWIDP
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