Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | P9301_07211 |
Symbol | |
ID | 4912644 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Prochlorococcus marinus str. MIT 9301 |
Kingdom | Bacteria |
Replicon accession | NC_009091 |
Strand | + |
Start bp | 641327 |
End bp | 642100 |
Gene Length | 774 bp |
Protein Length | 257 aa |
Translation table | 11 |
GC content | 28% |
IMG OID | 640160303 |
Product | 16S ribosomal RNA methyltransferase RsmE |
Protein accession | YP_001090945 |
Protein GI | 126696059 |
COG category | [S] Function unknown |
COG ID | [COG1385] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | [TIGR00046] RNA methyltransferase, RsmE family |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.664589 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGAAGACT TCACAAGATT AATTATTTCC CATGAAAGAA TTGAAAATAT TAAGAACAAT AATTTAAAAC TAAATAAAGA AGAGACTCAT TATATAAACA AAGTAATGAG GATAAAAAAT GGCAAAGAAA TTTTTATAGC TAACGGAGAG GGTTCATTAT GGAAAGCTAT AAAAATTAAA AATGATTGTT TAGAAATAGG TCAATTAAAA AAACCTTACT TATTTCAAGA GCAAGAAATT CACTTGTTAG GCATAGCTGT TGTTATACCA AAAAGTGGTT TTGAGGATAT TTTAAAAATG TGTACTGAAA TCGGAATTGA CTTTATACAG CCATTATTTT CAGAAAGACA GGTAAACAAA AATTTAAATT TTTCTAGAAA ACTTTTGAGA TGGAATTCAA TTATTAATGA AGCAGTTGAG CAAAGTGAGA GATTATGGAA ACCATCTATT TTAAATGGTA TGGATATTGT TGAATGGCTA AAAAGTAGAG ACAATCAAGA AAGAGTTTCA ATTTCAATAA CAAGAGAAGA AACACTATAT GACTTAAATC AATGGTTAAG AAAACAACAA GAATTTGTAA ATAGAAGAGG AGGTATTTTT TGGAACGTAA TTGGCCCTGA AGGAGGATGG TCCTCAAAAG AAATTGATTT TTTTAATAGA AAAAATATTG CCTTTGTTAA ACTGTCTGAC ACTATCTTAA GAACTTCAAC GGCTAGCATT AACGCATCAT CAATTCTAAA TCAGTGGAGA ATTGATTTAA AATTAAGGAA TTAG
|
Protein sequence | MEDFTRLIIS HERIENIKNN NLKLNKEETH YINKVMRIKN GKEIFIANGE GSLWKAIKIK NDCLEIGQLK KPYLFQEQEI HLLGIAVVIP KSGFEDILKM CTEIGIDFIQ PLFSERQVNK NLNFSRKLLR WNSIINEAVE QSERLWKPSI LNGMDIVEWL KSRDNQERVS ISITREETLY DLNQWLRKQQ EFVNRRGGIF WNVIGPEGGW SSKEIDFFNR KNIAFVKLSD TILRTSTASI NASSILNQWR IDLKLRN
|
| |