Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | P9301_07011 |
Symbol | |
ID | 4911477 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Prochlorococcus marinus str. MIT 9301 |
Kingdom | Bacteria |
Replicon accession | NC_009091 |
Strand | - |
Start bp | 625916 |
End bp | 626542 |
Gene Length | 627 bp |
Protein Length | 208 aa |
Translation table | 11 |
GC content | 38% |
IMG OID | 640160283 |
Product | hypothetical protein |
Protein accession | YP_001090925 |
Protein GI | 126696039 |
COG category | [N] Cell motility [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG2165] Type II secretory pathway, pseudopilin PulG |
TIGRFAM ID | [TIGR02532] prepilin-type N-terminal cleavage/methylation domain |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.212398 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGTTAAAT CTTTTTTTGT TAGAGCTCTG TCTCCAAAAA TCAGGTTTGA AAAAATCAAG AACCTAACTT CATTAAGAGA ATTAAAAGAT GAAGAGGGCT TCACACTTGT AGAATTAATT GTAGTAGTGA TGATGATTGG AATCCTTTCA TCAATTGCAA TCCCTCAATT TATGACTGCT GCCGATAAAG CAAAACAAAA AGAGGCAACA GGCATAGTAG CTGCTCTAGT TAAAGCTGCC ACAGCATTTC AAACAGAATA TGGTGATTTA CCTACTGATG CAGGGGACAT AGAAGAGTAT GCTAGATTTC AAAGATGTAA TCAAACTGGT ATGGAAACTG AAGGTGGAAA AGTTTGTAAA GGAACTGACC CTGTAGAAGT TCCAGGAACA GCAACTTCTT TTTATTCAAC ATCAGGTAAT TATTTGATTG AATTTCAAAC CGCCGACGTT AATAGCGATA CTGTTTTTCA GGTAAGAGCA CAACCAAATG GTGGTGCATA TGCAAATAAT GGTAGTGCTG TCACTGGATG TTATAACCCA GTCGATGCGA CTTCAAAAGT GTACGAAAAA ACTGCAAAAG CAGCAGATAG AGGAAGATTG ACCGACTGGA GTGATGCAGA GTGTTGA
|
Protein sequence | MVKSFFVRAL SPKIRFEKIK NLTSLRELKD EEGFTLVELI VVVMMIGILS SIAIPQFMTA ADKAKQKEAT GIVAALVKAA TAFQTEYGDL PTDAGDIEEY ARFQRCNQTG METEGGKVCK GTDPVEVPGT ATSFYSTSGN YLIEFQTADV NSDTVFQVRA QPNGGAYANN GSAVTGCYNP VDATSKVYEK TAKAADRGRL TDWSDAEC
|
| |