Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | P9301_06631 |
Symbol | pncA |
ID | 4910934 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Prochlorococcus marinus str. MIT 9301 |
Kingdom | Bacteria |
Replicon accession | NC_009091 |
Strand | - |
Start bp | 589405 |
End bp | 589974 |
Gene Length | 570 bp |
Protein Length | 189 aa |
Translation table | 11 |
GC content | 28% |
IMG OID | 640160244 |
Product | isochorismatase hydrolase family protein |
Protein accession | YP_001090887 |
Protein GI | 126696001 |
COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG1335] Amidases related to nicotinamidase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATGAATG ATCAAGAAAT CTCTTTTGAT AAATTATCAT CGAAAGTAAA CGCCTTGATA ATTATTGATA TTCAGGAAAA AATAATAAGA CCAATTTTTA ATAAGGATTC AATAATCAAA AACATTAAAA AGCTTACAAA TGCTTACCAA ATTTTAGAAG AAAACATATT TATATCTGAA CAGAACCCAA TCAAATTGGG AGTAACGATA CCTGAATTAT CACCAATAGC AGAATTTAGA AAATTTGAAA AAATGGAATT CAGCCTAGCT AAAATAGAAG ATTTTTTAAA AGAACTTAAA GATAAGAAAA TTACTAATTT GATAGTTTGT GGGATCGAAA CGCATATTTG TATTCAACAA ACAGTCTTAG ATTGTTTACA AAAAGGATTT GAAGTTACTC TCATATCAGA TTCCATGGGA AGTCGAAGTA GAGTAGATCA TGAAATAGCC TTACAAAGAA TGACTCAGAG TGGGGCGATC TTAACAACAA CTGAATCAAT AATTTTTGAA TTATGCAAAA CTGCGGATAG AGAAGAATTT AAAGAAATTA GAAACATAAT AATGAGTTAA
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Protein sequence | MMNDQEISFD KLSSKVNALI IIDIQEKIIR PIFNKDSIIK NIKKLTNAYQ ILEENIFISE QNPIKLGVTI PELSPIAEFR KFEKMEFSLA KIEDFLKELK DKKITNLIVC GIETHICIQQ TVLDCLQKGF EVTLISDSMG SRSRVDHEIA LQRMTQSGAI LTTTESIIFE LCKTADREEF KEIRNIIMS
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