| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | P9301_06621 |
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| Symbol | mscS |
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| ID | 4910933 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Prochlorococcus marinus str. MIT 9301 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009091 |
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| Strand | - |
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| Start bp | 588295 |
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| End bp | 589326 |
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| Gene Length | 1032 bp |
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| Protein Length | 343 aa |
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| Translation table | 11 |
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| GC content | 30% |
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| IMG OID | 640160243 |
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| Product | small mechanosensitive ion channel |
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| Protein accession | YP_001090886 |
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| Protein GI | 126696000 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3264] Small-conductance mechanosensitive channel |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.16712 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAATTAG TTACTGAAAA CTTCCTTCTG GCAATATCTA TTTTTTTCAT TGGAACTTTA
TTGTCGATAA TAATTTCAAA AGTTTCAAAA ATATTTTTTA AAAAGATTTC CAAAAGAACA
AAAACAAATT TCGATGATTT TATTTTTGAG GTGATCTCTG GAATCATAAA ACCTATAGGT
TTCCTCCTAT CATTTTATTT TTCAATTGAC TATTTTTTTG CTGATGAAAT AACTTTCATC
TCTGTCATAT TGAATATTTT GAAATTATTT ATATTAATAA TCATCATAAA AGCTCTCAAC
AAAGTTTTAA TAAGATCTTT AACAGAAACG ACCTCGAAAA TTAATGATTC CTCAATTAGT
TCGATGGTAT CTTCACTAAC CCCATTGATA AAAGCATTAA CATGGACTAT TGGCTCAATT
TTTTTCTTAC AAAATATAGG TGTTCAAATG ACTGCTATTT GGGCTTTACT AAGTGCAGGA
GGTATTGGAG CAGGACTAGC TTTGAAAGAT CCAGTTCAGG AGTTCTTTGA ATATATAACA
ATTTTGCTTG ATAAACCTTT TCAAAAAGGT GAGTTTATAA AATCTGATGG AGTCCTCGGA
ATGGTTGAGA GAGTTGGAGT AAGATCATCA AGGATAAGAA GTATTAATGG AGAAGTAATA
GTAATGAGTA ATAGCGCCCT AACAAATGGA ATAATTTCAA ATTACGCACA AATGGAAAAA
AGAAGGTTAG TACATAAATT GGGAGTAGTT TATGAAACCT CTCCAAAACT TATGAAATTG
ATTCCAATAA TAATTAAAAA AATAGTTGAA GAGACAAAAG ATGCTTCTTT TGATAGATGT
CATTTCACAG ATTTCGGAGA CTTCAGTCTT AATTTCGAAC TTGTTTATTA CATCCCAACA
AATAATTATC TCGCCGCAAT GGAAGCGCAA CAATCTATAA ATTTAAGAAT TATTGAGGAA
TTTGCGTTTA ATAATATAGA GTTTGCATTC CCAACACAAA CCTTAAATAT TGAAAGTAAC
AAAGCCAAAT GA
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| Protein sequence | MKLVTENFLL AISIFFIGTL LSIIISKVSK IFFKKISKRT KTNFDDFIFE VISGIIKPIG
FLLSFYFSID YFFADEITFI SVILNILKLF ILIIIIKALN KVLIRSLTET TSKINDSSIS
SMVSSLTPLI KALTWTIGSI FFLQNIGVQM TAIWALLSAG GIGAGLALKD PVQEFFEYIT
ILLDKPFQKG EFIKSDGVLG MVERVGVRSS RIRSINGEVI VMSNSALTNG IISNYAQMEK
RRLVHKLGVV YETSPKLMKL IPIIIKKIVE ETKDASFDRC HFTDFGDFSL NFELVYYIPT
NNYLAAMEAQ QSINLRIIEE FAFNNIEFAF PTQTLNIESN KAK
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