| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | P9301_06341 |
|---|
| Symbol | menB |
|---|
| ID | 4911121 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Prochlorococcus marinus str. MIT 9301 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009091 |
|---|
| Strand | + |
|---|
| Start bp | 562037 |
|---|
| End bp | 562894 |
|---|
| Gene Length | 858 bp |
|---|
| Protein Length | 285 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 36% |
|---|
| IMG OID | 640160215 |
|---|
| Product | naphthoate synthase |
|---|
| Protein accession | YP_001090858 |
|---|
| Protein GI | 126695972 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0447] Dihydroxynaphthoic acid synthase |
|---|
| TIGRFAM ID | [TIGR01929] naphthoate synthase (dihydroxynaphthoic acid synthetase) |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAAGTAT TACCTGGTAA AACAAGCTTA AATTGGACAG AATACAAATC TTATGAGGAT
ATATTGTTTC ATAAATCAGA TGAGGGAATT GCGAGAATTG CAATTAATCG CCCTGAAAAA
AGAAATGCAT TTAGGCCACA AACTGTAGAT GAACTCATTA ACGCATTTAA TATCGTAAGA
AATGATGAAA ATATTGGAGT AGTTCTTTTT ACAGGTGCGG GACCTGACAA GAGAGGTATT
TATTCTTTTT GCTCTGGAGG CGATCAGAGT GTAAGAGGTG AAAATGGATA TAAAAATGAT
GAAGGGAAGC AGAGGTTAAA TGTACTTGAA CTTCAAAGAT TAATAAGAAG TTTGCCTAAA
GTAGTTATTG CCTTAGTTCC TGGTTTTGCA ATTGGAGGAG GTCAGGTACT TCATTTAATT
TGTGATCTTA GCATTGCCGC AGAAAATGCA ATTTTTGGTC AAACAGGTCC AAGAGTTGGT
AGTTTTGATG CTGGATTTGG ATCTAGTTAT TTGGCAAGAC TCGTTGGTCA AAGAAAAGCA
AAAGAAATTT GGTTTTTATG TAGAAAATAT AATTCGAAAG AAGCATTAGA GATGGGCTTG
ATAAATGCAA TTACAAAGAT TGAAGAATTA GAAGCTGAGG GTGTAATCTG GGCAAGAGAG
ATTTTACGTA ATAGTCCTAC TGCTATTCGT ATTCTTAAGG CTTCATTCAA CGCGGAGAAT
GATGGAATTG CTGGTATTCA AGAATTATCT GGATACACAA CTCAATTATT TTATTCGTCT
GAAGAAGCTC AAGAAGGTAG AGATGCCTTT CTCGAGAAGC GTCCACCAGA CTTTTCTGAA
TATAAGTGGA CACCCTAG
|
|---|
| Protein sequence | MKVLPGKTSL NWTEYKSYED ILFHKSDEGI ARIAINRPEK RNAFRPQTVD ELINAFNIVR
NDENIGVVLF TGAGPDKRGI YSFCSGGDQS VRGENGYKND EGKQRLNVLE LQRLIRSLPK
VVIALVPGFA IGGGQVLHLI CDLSIAAENA IFGQTGPRVG SFDAGFGSSY LARLVGQRKA
KEIWFLCRKY NSKEALEMGL INAITKIEEL EAEGVIWARE ILRNSPTAIR ILKASFNAEN
DGIAGIQELS GYTTQLFYSS EEAQEGRDAF LEKRPPDFSE YKWTP
|
|---|
| |