| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | P9301_06331 |
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| Symbol | menD |
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| ID | 4911120 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Prochlorococcus marinus str. MIT 9301 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009091 |
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| Strand | + |
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| Start bp | 560238 |
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| End bp | 562001 |
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| Gene Length | 1764 bp |
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| Protein Length | 587 aa |
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| Translation table | 11 |
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| GC content | 29% |
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| IMG OID | 640160214 |
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| Product | menaquinone biosynthesis protein |
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| Protein accession | YP_001090857 |
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| Protein GI | 126695971 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG1165] 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase |
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| TIGRFAM ID | [TIGR00173] 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.635871 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACATCAT CTATTGAATG CCAAAATTTT CTTAGAAGTT TACAACTTTT GAATCTTCTT
ATAAAAATAG GAGTTCAAAA TTTAATACTA TGTCCTGGTA GTAGATCAGC ACCTTTAGCA
ATAGCTGCTG GAGAATTAAA TAAATTAGGA ATGGTAAATA TTTTTAATTC AATAGATGAG
AGATCAGCGG GATTCCACTC TCTTGGGATT TCTGCCGCAT CAGGTAATCT TTCTTTAGTT
ATTACAACTT CTGGGACTGC GGTAAGTAAC TTATTGCCAG CAGCAGTTGA GGCAGATCGA
TCTTGTAAAG GTGTTATATT TCTTACTGCC GACAGACCCT TAAGATTAAA AGATTGTGGC
GCTAACCAAA CAGTAAATCA AGAAGATTTT TTGAGTTCAG TGTGTAGAAG TGTTTTAAGT
ACAAATCTAA ATGGACTTCA TGAAACGCAA GAAAATGAAA TCTTGAATTT AGTTCGAATT
ACTGAGAAAC AAATATCAAC CTTCCCTGGT CCTATTCATT TAAATATTCC TATTGATAAG
CCTTTAGATA TTTCATTTTT GAATAAAAAA AATGTTTTAG AGGTTTTTAA AAGAATTTAT
TTAAAGAAAC AATATGTCTT TCAAAAAGTT GAAATAAAGT CTGATAAAAA CAAATTCTTA
GAAATTTCAA AAATTTTTAA TTTAGATGAA TCTGGCATTA TTTTGGTAGG TCCCTATCAA
GGTTCAGTAA ATGACTTATC TTCTTTCAAT AAATCTTTAG AACAATTACA AGAAATTACT
GGTTGGCCAG TATTTGCTGA TCCTGTTTCA GGAGTTTATT CTGATTTGAG AGGATTAGTT
GTAAATTGGG AATTAGTCTT AAGAAAACAT AAGAATCTTA TTAAATGTAA ACAACTTTTA
AGGCTTGGTC CTATGTCATC TTCAATTGAT TTAGAGAATT TTCTAATAAA GTTTGAAGGT
ATACAAATTC TTATAAAAGA AAAAAATTAT AGAAAATTGG ACCCTATAAA AAAATCATTT
GAATATGATT TTGGGCTATT AAATTTTACT TCTATATTGC TAGAGGAATT ATCATTTAAT
GAAAAAAACA AAAAGTCTCT TACTCCGTTA GCTCTAGATC TCATAGAGGA AGGTAAGCAA
ATTAAAGATA TTTTAAAAGA CGAAATTATT ATTGATAATA AAATTACTGA ATATAAGCTT
GCAAATCTTG TTCCAAAGCT TTGGCCAGCT GAACATCCAA TAATGCTCTC CGCTAGTAGC
CCGATTAGAG ATTGGCTTAC TTTTTCTGAG AATGGTACTT TAACAAGAAA TTGTTTCAGC
TTTAGAGGAG CTTCTGGAAT AGATGGTACT TTATCTCTTG CATTAGGAAT TTCTAGAATT
AAAAATCCTT TACTTCTCGT GACTGGGGAT TTGGCTTTTG TTCATGATAT AAACGGTTGG
CTAATTGAGA ATTCAGTCGA CATGAATTTA ACAATTCTTC TAATAGATAA TAATGGTGGA
AATATATTTA ATCGTATTTA TAAAAAAAAT TTAAAAGAAG ATGAATTTAA AAAACTATTT
CTTATGCCTA AAGAAATAAA CTGGTCAAAA CTCTCAGAGA GCTATCAAGT AAAATTTAAA
AGTGTGTCAA ATTTTAAAAA ATTACGAGAG GCATTCGATT GGAGCATTTC TATCCAGAAA
TCTGTAATAA TTAAAGTTGA TATTGATCCA GAAAATGAAA TTTATGAAAA AAATGCCCTG
CTAGAAAAAA TAATTGGCAG TTAA
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| Protein sequence | MTSSIECQNF LRSLQLLNLL IKIGVQNLIL CPGSRSAPLA IAAGELNKLG MVNIFNSIDE
RSAGFHSLGI SAASGNLSLV ITTSGTAVSN LLPAAVEADR SCKGVIFLTA DRPLRLKDCG
ANQTVNQEDF LSSVCRSVLS TNLNGLHETQ ENEILNLVRI TEKQISTFPG PIHLNIPIDK
PLDISFLNKK NVLEVFKRIY LKKQYVFQKV EIKSDKNKFL EISKIFNLDE SGIILVGPYQ
GSVNDLSSFN KSLEQLQEIT GWPVFADPVS GVYSDLRGLV VNWELVLRKH KNLIKCKQLL
RLGPMSSSID LENFLIKFEG IQILIKEKNY RKLDPIKKSF EYDFGLLNFT SILLEELSFN
EKNKKSLTPL ALDLIEEGKQ IKDILKDEII IDNKITEYKL ANLVPKLWPA EHPIMLSASS
PIRDWLTFSE NGTLTRNCFS FRGASGIDGT LSLALGISRI KNPLLLVTGD LAFVHDINGW
LIENSVDMNL TILLIDNNGG NIFNRIYKKN LKEDEFKKLF LMPKEINWSK LSESYQVKFK
SVSNFKKLRE AFDWSISIQK SVIIKVDIDP ENEIYEKNAL LEKIIGS
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