| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | P9301_05761 |
|---|
| Symbol | rbcL |
|---|
| ID | 4911797 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Prochlorococcus marinus str. MIT 9301 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009091 |
|---|
| Strand | + |
|---|
| Start bp | 503604 |
|---|
| End bp | 505019 |
|---|
| Gene Length | 1416 bp |
|---|
| Protein Length | 471 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 41% |
|---|
| IMG OID | 640160156 |
|---|
| Product | ribulose bisophosphate carboxylase |
|---|
| Protein accession | YP_001090800 |
|---|
| Protein GI | 126695914 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG1850] Ribulose 1,5-bisphosphate carboxylase, large subunit |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 0 |
|---|
| Plasmid unclonability p-value | 0.0310846 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGTAAGA AGTATGACGC AGGGGTAAAG GAGTACAGAG ATACCTACTG GACTCCAGAA
TATGTACCCC TAGACACCGA TTTACTAGCC TGTTTCAAAT GTACAGGTCA AGAAGGTGTC
CCAAGAGAAG AAGTTGCAGC AGCTGTTGCC GCTGAATCTT CAACAGGTAC TTGGTCAACA
GTTTGGTCCG AGTTACTTAC AGACTTAGAA TTTTATAAAG GACGTTGTTA TCGAATCGAA
GACGTCCCTG GAGATCCTGA AGCTTTCTAT GCTTTTATTG CATATCCTTT AGATCTTTTT
GAAGAAGGCT CAATTACAAA CGTATTAACA TCTCTTGTAG GAAACGTTTT TGGATTTAAA
GCTCTAAGGC ATCTACGTCT AGAAGATATT AGATTCCCAA TTGCTTTCAT TAAAACTTGC
GGTGGTCCAC CAAACGGAAT CGTAGTTGAA AGAGATCGAC TTAACAAATA CGGAAGACCT
CTACTTGGTT GTACCATCAA ACCTAAATTA GGATTATCTG GTAAAAACTA TGGTCGAGTT
GTATATGAAT GTCTTAGAGG CGGTCTTGAT TTAACGAAGG ATGATGAGAA TATCAATTCT
CAACCATTCC AACGTTGGAG AGAAAGATTT GAGTTTGTTG CAGAAGCAGT CAAGCTTGCT
CAGCGAGAAA CTGGAGAAGT TAAAGGTCAC TACCTAAATT GTACTGCTAA CACTCCTGAA
GAACTCTATG AAAGAGCTGA ATTTGCAAAA GAGCTAGATA TGCCAATCAT CATGCATGAT
TATATAACTG GTGGTTTTAC TGCAAATACT GGATTAGCTA ATTGGTGTCG TAAAAATGGC
ATGCTTCTGC ATATTCATAG AGCTATGCAT GCTGTTATCG ATAGACATCC AAAGCATGGT
ATTCACTTCA GAGTTCTTGC AAAATGTTTG AGACTATCTG GAGGAGACCA ACTACATACT
GGAACCGTGG TTGGAAAACT AGAAGGTGAT CGTCAAACAA CTCTTGGTTA TATTGACAAC
TTAAGAGAGT CATTTGTTCC TGAAGATAGA TCAAGAGGAA ACTTCTTTGA TCAAGATTGG
GGTTCAATGC CTGGAGTATT TGCAGTTGCA TCAGGTGGTA TCCATGTTTG GCATATGCCT
GCACTTCTTG CGATCTTTGG GGATGATTCT TGTCTTCAGT TCGGTGGAGG AACACATGGT
CATCCATGGG GTTCAGCTGC TGGAGCTGCA GCTAACAGAG TTGCTTTAGA AGCTTGTGTA
AAAGCCCGTA ATGCTGGTCG CGAAATCGAA AAAGAGAGTA GAGACATTCT TATGGAAGCT
GCTAAGCATA GTCCTGAATT AGCTATTGCT CTAGAAACTT GGAAGGAAAT TAAGTTCGAG
TTTGACACTG TCGACAAGCT TGACGTTCAG GGTTAA
|
|---|
| Protein sequence | MSKKYDAGVK EYRDTYWTPE YVPLDTDLLA CFKCTGQEGV PREEVAAAVA AESSTGTWST
VWSELLTDLE FYKGRCYRIE DVPGDPEAFY AFIAYPLDLF EEGSITNVLT SLVGNVFGFK
ALRHLRLEDI RFPIAFIKTC GGPPNGIVVE RDRLNKYGRP LLGCTIKPKL GLSGKNYGRV
VYECLRGGLD LTKDDENINS QPFQRWRERF EFVAEAVKLA QRETGEVKGH YLNCTANTPE
ELYERAEFAK ELDMPIIMHD YITGGFTANT GLANWCRKNG MLLHIHRAMH AVIDRHPKHG
IHFRVLAKCL RLSGGDQLHT GTVVGKLEGD RQTTLGYIDN LRESFVPEDR SRGNFFDQDW
GSMPGVFAVA SGGIHVWHMP ALLAIFGDDS CLQFGGGTHG HPWGSAAGAA ANRVALEACV
KARNAGREIE KESRDILMEA AKHSPELAIA LETWKEIKFE FDTVDKLDVQ G
|
|---|
| |