Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | P9301_05001 |
Symbol | rplS |
ID | 4912457 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Prochlorococcus marinus str. MIT 9301 |
Kingdom | Bacteria |
Replicon accession | NC_009091 |
Strand | - |
Start bp | 436257 |
End bp | 436736 |
Gene Length | 480 bp |
Protein Length | 159 aa |
Translation table | 11 |
GC content | 36% |
IMG OID | 640160080 |
Product | 50S ribosomal protein L19 |
Protein accession | YP_001090724 |
Protein GI | 126695838 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0335] Ribosomal protein L19 |
TIGRFAM ID | [TIGR01024] ribosomal protein L19, bacterial type |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.112658 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACCAAAA TGGCCAAAGA GAAACAAGAG AAGGATTTAG AAACCGGTAT TAAAGCTGGA GCATCAGTTG ATGTGGCAGT TGAACAAAAA GAAAAAAATA CGGTTTCTGA GACTACGCAA ACCTTAAGCG CATCCAATCT TATTAAGGAA TTTGAGAACG AACAATTAAA AAAAGAATTA CCTGAAATTT ATGTTGGGGA CACTGTTAAA GTTGGTGTGA AAATTACAGA AGGTAATAAA GAAAGAGTCC AACCTTATGA AGGCGTTGTC ATAGCAAAAA GACATGGAGG AATTAACCAG ACTATTACAG TTAGAAGAAT TTTTCAGGGT ATAGGTGTTG AAAGAGTATT TATGCTACAT AGTCCACAGG TTGCCTCTCT AAAAGTTGAA CGTAGAGGTA AAGTAAGAAG AGCTAAGTTA TTCTATCTGA GAGATAGAGT AGGAAAAGCT ACTCGCGTAA AACAACGCTT TGATCGATAA
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Protein sequence | MTKMAKEKQE KDLETGIKAG ASVDVAVEQK EKNTVSETTQ TLSASNLIKE FENEQLKKEL PEIYVGDTVK VGVKITEGNK ERVQPYEGVV IAKRHGGINQ TITVRRIFQG IGVERVFMLH SPQVASLKVE RRGKVRRAKL FYLRDRVGKA TRVKQRFDR
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