| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | P9301_04761 |
|---|
| Symbol | groEL |
|---|
| ID | 4912653 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Prochlorococcus marinus str. MIT 9301 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009091 |
|---|
| Strand | - |
|---|
| Start bp | 416187 |
|---|
| End bp | 417932 |
|---|
| Gene Length | 1746 bp |
|---|
| Protein Length | 581 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 38% |
|---|
| IMG OID | 640160054 |
|---|
| Product | chaperonin GroEL |
|---|
| Protein accession | YP_001090700 |
|---|
| Protein GI | 126695814 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG0459] Chaperonin GroEL (HSP60 family) |
|---|
| TIGRFAM ID | [TIGR02348] chaperonin GroL |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 1 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCCAAAC AGTTAAGTTT TTCTAATGAG TCAAGAGAAG CGCTAGAAAA AGGTGTGAAT
TTCGTAGCTA ATGCAGTAAA GGTTACTATT GGGCCAAAAG CAAAAAACGT TGTAATAGAG
AAGAAATTTG GTTCGCCAGA TATAGTAAGA GATGGATCTA CAGTTGCTAA AGAGATCGAG
ATTGAAAACC CCATCTCTAA TTTAGGTGCG AAATTAATAG AACAAGTTGC ATCCAAGACA
AAAGAGAGTG CTGGTGATGG AACAACAACA GCAACCATTT TGACTCAGAA GATGGTTCAG
GAGGGTTTGA AAAATATTGC CTCTGGCGCA AACCCTATGG AGTTAAAAAA AGGTATGGAG
GCAGGCCTAT CTTTTGTCTT AGAAAAATTA AGTTCCAAAA GTATTTCATT AAGTGGTTCT
GACATCCAAA AAGTTGCAAC AGTTAGTGCT GGAGGTGATG AAGAAATTGG ATCTATAATT
TCGAAAGCAA TGGATATTGT TACTTCAGAT GGTGTAATAA CTGTCGAAGA ATCGCAATCA
TTAGAAACAG AATTAGATAT AACTGAAGGT ATGTCTTTTG ATAGAGGTTA TAGTTCTCCA
TATTTTGTAA CGGACCAAGA AAGACAAGTT TGTGAACTTG AAAATCCAAA AATATTAATA
ACTGATCAAA AAATCTCAAC TTTAGTTGAT CTAGTTCCAA TACTTGAAGA AATTCAGAAG
TCAGGCTCAC CTTTTCTAAT TCTTGCTGAA GATATCGAAG GAGAGGCTTT AACTACTCTA
GTTTTAAATA AGAATAGTGG GGTTTTAAAT GTTGCTTCCG TAAGGGCTCC ATTATTTGGT
GAGAGAAGAA AAGCTGCCCT CGAAGATATT GCAATTCTTA CAGGGGCTAA GTTAATTAGC
GAAGATAAAT CGATGACACT TGATAAAGTA TCGATTAACG ATTTAGGTAA AGCAAAAAAA
ATAACTATCA CAAAGGACAA AACTACAATT GTTGCCTTCG AAGACACTAA AGATTTAGTT
AAAGGGAGAG TAGAGAAATT AAAGAGAGAA GTTAATATAA CTGAATCTGA GTATGATCAA
GATAAAATCA ATGAAAGGAT AGCCAAACTA GCTGGAGGAG TAGCTCTTAT CAAAGTAGGA
GCTGCCACAG AAACAGAGAT GAAGTATAAA AAATTGAGAA TCGAAGATTC CCTTAATGCT
ACGAAAGCTG CTATTGAAGA GGGTGTTGTT TCTGGAGGAG GACAAACTCT AATTGAAATA
TCAGATGACC TTTTAAATTT AAGTAAAACA TCTACAGATG ATTTAAGAAC AGGGATAAAT
ATAGTCAAAG AAGCCCTCTT GGAACCCACC AAACAAATAG CAAAAAATGC TGGTTTTAAT
GGAGATGTAG TTGTCGCTGA AATTAAAAGA CTTAACAAAG GCTTTAATGC TAATTCAGGA
AAATATGAGG ACTTAAAAGA TTCAGGGATA TTAGATCCAA CCAAAGTAAT AAGATTAGCT
CTTCAAGATT CAGTATCTAT TGCAGCTATG CTCCTCACAA CAGAAGTTGC GATGGCAGAC
ATTCCAGAGC CTGAAGCCGC AGGCCCTGGA GGACCAGGTG CAGATCCAAT GGGAGGAATG
GGTGGCATGG GAATGCCAGG TATGGGTGGC ATGGGAATGC CAGGTATGGG TGGCATGGGA
ATGCCAGGTA TGGGTGGCAT GGGAATGCCA GGTATGGGTG GCATGGGAAT GCCAGGTATG
ATGTAG
|
|---|
| Protein sequence | MAKQLSFSNE SREALEKGVN FVANAVKVTI GPKAKNVVIE KKFGSPDIVR DGSTVAKEIE
IENPISNLGA KLIEQVASKT KESAGDGTTT ATILTQKMVQ EGLKNIASGA NPMELKKGME
AGLSFVLEKL SSKSISLSGS DIQKVATVSA GGDEEIGSII SKAMDIVTSD GVITVEESQS
LETELDITEG MSFDRGYSSP YFVTDQERQV CELENPKILI TDQKISTLVD LVPILEEIQK
SGSPFLILAE DIEGEALTTL VLNKNSGVLN VASVRAPLFG ERRKAALEDI AILTGAKLIS
EDKSMTLDKV SINDLGKAKK ITITKDKTTI VAFEDTKDLV KGRVEKLKRE VNITESEYDQ
DKINERIAKL AGGVALIKVG AATETEMKYK KLRIEDSLNA TKAAIEEGVV SGGGQTLIEI
SDDLLNLSKT STDDLRTGIN IVKEALLEPT KQIAKNAGFN GDVVVAEIKR LNKGFNANSG
KYEDLKDSGI LDPTKVIRLA LQDSVSIAAM LLTTEVAMAD IPEPEAAGPG GPGADPMGGM
GGMGMPGMGG MGMPGMGGMG MPGMGGMGMP GMGGMGMPGM M
|
|---|
| |