Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | P9301_04731 |
Symbol | ccmA |
ID | 4911196 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Prochlorococcus marinus str. MIT 9301 |
Kingdom | Bacteria |
Replicon accession | NC_009091 |
Strand | + |
Start bp | 413728 |
End bp | 414744 |
Gene Length | 1017 bp |
Protein Length | 338 aa |
Translation table | 11 |
GC content | 31% |
IMG OID | 640160051 |
Product | putative multidrug efflux ABC transporter |
Protein accession | YP_001090697 |
Protein GI | 126695811 |
COG category | [V] Defense mechanisms |
COG ID | [COG1131] ABC-type multidrug transport system, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAATTATA TAAAAGTTAA AGGGCTCTCA AAATCTTATT CAGATATCAA TGCATTAAAA AATTTATCAA TGGAAATTCA AGCTGGCACA TTATTCGGAA TACTAGGTCC AAATGGTGCT GGCAAATCAA CACTAATAAA AATACTCGCT ACTTTAATAG AGCCTGATAG TGGAGAAGTT TTTATAAATA ATATTAATCT GATAAAAAAT TCCAGGAAAA TTAGAGAATT AATTGGTTAT GTTGCCCAAG ACATTGCACT TGATAAAATA TTAACTGGAC GAGAGCTTTT GGACTTTCAA TCAGATTTAT ATCACATCAA CAAAAATAAA AAATTTGAGA GGATAAATCA ATTAATAGAT CAATTAGAAA TGAATGATTG GATTGATCGT AAGTGTGGAA CTTACTCAGG GGGAATGAAA AGAAGAATAG ATCTGGCAGC TGGACTTTTA CATTTACCCC AAGTATTAAT TTTGGATGAA CCTACAGTTG GTTTAGATAT TGAAAGTAGA AATATTATAT GGCAACTTTT GAAAGATTTG AGAAATAATG GAATGACCAT TATTTTAAGT AGTCACTATC TTGATGAAAT AGATAAATTG GCTGACAGAT TAGTGATAAT TGATGATGGA AGAGTTATAG CAAAAGGGAC TCCTGCAGAG CTCAAAAATA AATTAGGAGG AGATAGAGTA ACTTTGAAAG TAAGAGAATT TAGTAATCAG GAAGAAGCAA AAAATATATG TAAAATTTTA TCTTCAATAG ATGGAATTAG TCAGATTATC ATAAATGAAG CTCAAGGTTT CTCGATAAAT TTCGTAGCAA ATAAGCAAAA AGATTTACTT ACGAAGCTAA AAGTGGAATT GGCCTTCTCA AAGTTTGAAA TTTTTTCTCT TACCCAAAGT CAGCCAAGCT TGGATGATGT ATATCTTCAG GCAACTGGGA AAACATTATT GGACGCTGAA ATTTCTATGG CAGGGAAAAG AGACTTTAAA AAAGAATCAA AGCAATCCAT GCGATAA
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Protein sequence | MNYIKVKGLS KSYSDINALK NLSMEIQAGT LFGILGPNGA GKSTLIKILA TLIEPDSGEV FINNINLIKN SRKIRELIGY VAQDIALDKI LTGRELLDFQ SDLYHINKNK KFERINQLID QLEMNDWIDR KCGTYSGGMK RRIDLAAGLL HLPQVLILDE PTVGLDIESR NIIWQLLKDL RNNGMTIILS SHYLDEIDKL ADRLVIIDDG RVIAKGTPAE LKNKLGGDRV TLKVREFSNQ EEAKNICKIL SSIDGISQII INEAQGFSIN FVANKQKDLL TKLKVELAFS KFEIFSLTQS QPSLDDVYLQ ATGKTLLDAE ISMAGKRDFK KESKQSMR
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