Gene P9301_04581 details

Gene Information

• Locus tag: P9301_04581
• Symbol: salX
• ID: 4910968
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Prochlorococcus marinus str. MIT 9301
• Kingdom: Bacteria
• Replicon accession: NC_009091
• Strand: -
• Start bp: 397666
• End bp: 398352
• Gene Length: 687 bp
• Protein Length: 228 aa
• Translation table: 11
• GC content: 35%
• IMG OID: 640160036
• Product: ABC transporter ATP-binding protein
• Protein accession: YP_001090682
• Protein GI: 126695796
• COG category: [V] Defense mechanisms
• COG ID: [COG1136] ABC-type antimicrobial peptide transport system, ATPase component

Plasmid Coverage information

• Num covering plasmid clones: 21
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTCTAAGA AAGTCGCAAG TTTAGAAAAA ATATCTAAAA CATATGGAAA AGATGATCTA 
ACTGTTAAAG CCTTAGACAG TATAAATTTA GAAATTTATA AAGGTGATTA TTTAGCTGTA 
ATGGGAGCAA GTGGCTCAGG CAAAAGTACA GCCATGAATA TTATTGGATG TCTAGATAGA 
CCCTCTGAAG GTGTTTACAA ATTAAATGGT ATCCCTGTTG AGAATTTATC TGATGATGAG 
TTAGCCGAAA TACGTAACCA AAAATTAGGC TTCGTTTTTC AACAATTTCA TCTTCTTTCA 
GATGCAACTG CACTTGAGAA CGTAATTTTG CCAATGATTT ATGCTGGTAT TGAACCTGAG 
CAAAGATTAA TGCGAGGTAA GAATGCCCTA AAAAAAGTTG GCCTTTCAGA AAGAATGAAT 
AATCGCCCAA ACCAATTATC CGGAGGTCAA CAACAACGAG TTGCTATTGC GAGGGCTATT 
ATCAATAACC CCGCAATTTT GTTAGCAGAC GAACCTACTG GAGCACTAGA TTCAAAAACC 
ACTGAAGATG TATTAGATCT TTTTGACAAA CTGCATGAAT CTGGAATAAC TATAGTTTTA 
GTTACGCATG AAGATGAAGT TGCAAATCGC GCAAAAAAAA TTGCCAAATT TAAGGATGGA 
AGAATAGTTG AATTAAAAGT TAATTAA 

 

Protein sequence

MSKKVASLEK ISKTYGKDDL TVKALDSINL EIYKGDYLAV MGASGSGKST AMNIIGCLDR 
PSEGVYKLNG IPVENLSDDE LAEIRNQKLG FVFQQFHLLS DATALENVIL PMIYAGIEPE 
QRLMRGKNAL KKVGLSERMN NRPNQLSGGQ QQRVAIARAI INNPAILLAD EPTGALDSKT 
TEDVLDLFDK LHESGITIVL VTHEDEVANR AKKIAKFKDG RIVELKVN