Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | P9301_04511 |
Symbol | mrcB |
ID | 4911297 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Prochlorococcus marinus str. MIT 9301 |
Kingdom | Bacteria |
Replicon accession | NC_009091 |
Strand | - |
Start bp | 391819 |
End bp | 393588 |
Gene Length | 1770 bp |
Protein Length | 589 aa |
Translation table | 11 |
GC content | 27% |
IMG OID | 640160029 |
Product | putative penicillin binding protein |
Protein accession | YP_001090675 |
Protein GI | 126695789 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0744] Membrane carboxypeptidase (penicillin-binding protein) |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 0 |
Plasmid unclonability p-value | 0.534356 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | GTGCAAAAGA TTAAATTCAA ATCTTTTGTT TTAATAATTC CAATATTAAT TTTTTCTGGA ATATCTTTTT ATTTTTTTAG TTTAATATTT AGTACCTTAA AATTTGACGT TTCTAAAAAT AAAAAGTCTC GGGAAACCAA ATATTCTTAC GTAATATCAT CTTCTGATAA TAAGATACTA AGCAAATTAA GCCGCAAATT TGAAATAGAT AATAATCATC ATAAAATTCC ATTTTTTATT AAACATTCTT TTATATCTTC TGAGGATAAA AGATTTTATA AACATAATGG AATAGATTTA AAAAGTATTT CACGTGCCCT TTTCCAAAAT ATTAGAAGTG GTTATGTCAA AGAGGGAGGA AGTACGATTA CACAACAAGT TGCTAGATTA CTTTTTCTAA ATAATGATCT AAGTTTTCAA AGAAAAATCA AAGAAATATT TATATCACTC ATACTTGAAT TTAGATATAA CAAAAATCAA ATTTTAAAAT TATATTTAAA TAATATTTAT CTAGGATCAG GAGCATACGG GGTAGACGAG GCTGCCCAAG TTTATTTTGG AAAATTTATA GAAGAATTGA CATTATCAGA GATCGCATTA ATTGCAGGAT TAGCTCCAGC TCCATCAATT TATTCACCTT ATCAAAATTT AGAACTAGCT ATTGAAAATA GAAATAAAGT TCTTGAATCA ATGTATGTTG ATGGATATAT TTCTCATACA AATAAGAATA AGGCTATTAA AGAAAAAATA AAGTTAAATT ATCAAACAGC TGATAATTTT TTAGATGATA AATTACTAAT AAACTTTATT CTTCAGGAAA CAGATAAAAA AATTGGAAGT AAAAATGATT ATAAGTTTTT AAGAATTAAA TCTTCTATCA ACAAAGATTG GCAAGAAAAA GGCCAAAAAA TATCAAGGTA CGCAGGTCCT AAAGAACTTG AATTTGGTCT GTTATCTATC GAATCAAACA CAGGACTAAT CAGGACAATG ATAACCAGCA AAAATCCAGC AATTAATGAA TACAATAGAG TGATTACATC TGTAAGACCT TTAGCTTCTA CTTTTAAAAT AATTCCTTAT GCTGCTGCAT TAATAGAAGG AATAAAATTA AGCGATAAAT TTGAAGACTT ACCAACATGC TGGGAAAGTT ATTGTCCAAA AAATTTTTCA GAAGACTATA GAGGTTCAAT ATCTTTGATT GAATCATTTA AAAGTTCCTC AAATATCGTT CCAATATCAA TAACAAAAAA AATCGGCTTA AAAAATATTA TTAATTTAGC GAATTCATTT GGACTAGGAT ACGAGCAAGA GTTTGAGGAA TTCCCAGCAT TAGCTATTGG CGCCTACGGA GATAATCTTT TAAACATCAC AAATGCATAT TCTGCAATAA ACAATAATGG GAAAATTCAA AGCCCTGAAA TCATAGAAAA AATAGAATCA TTTAAAAAAC AACCTATTTG GGAAAATAAA TCTATTTCCA AGAAAATATT AGATTTAAAA ATAAACAAGA AATTAAATAA ACTTCTACAA AATTCTGTAA AGGAAGGCAC TTCAAAAGCA GCCTCTATTA AAGGAAAGAA AATTTATGGG AAAACAGGAA CATCTGATGG AAATAAAGAT CTCTGGTTTA TTGGTTCCAT TGATAACCTT ACAACAGGGA TCTGGATAGG TTACGACGAT AACAAGGAAT CTGAATTATC TAGTGGGAAT GCAGCTTATT TATGGAAGAA GTTCATATCT GAAATTTATA AAATTCCAAT TAAAAAATAA
|
Protein sequence | MQKIKFKSFV LIIPILIFSG ISFYFFSLIF STLKFDVSKN KKSRETKYSY VISSSDNKIL SKLSRKFEID NNHHKIPFFI KHSFISSEDK RFYKHNGIDL KSISRALFQN IRSGYVKEGG STITQQVARL LFLNNDLSFQ RKIKEIFISL ILEFRYNKNQ ILKLYLNNIY LGSGAYGVDE AAQVYFGKFI EELTLSEIAL IAGLAPAPSI YSPYQNLELA IENRNKVLES MYVDGYISHT NKNKAIKEKI KLNYQTADNF LDDKLLINFI LQETDKKIGS KNDYKFLRIK SSINKDWQEK GQKISRYAGP KELEFGLLSI ESNTGLIRTM ITSKNPAINE YNRVITSVRP LASTFKIIPY AAALIEGIKL SDKFEDLPTC WESYCPKNFS EDYRGSISLI ESFKSSSNIV PISITKKIGL KNIINLANSF GLGYEQEFEE FPALAIGAYG DNLLNITNAY SAINNNGKIQ SPEIIEKIES FKKQPIWENK SISKKILDLK INKKLNKLLQ NSVKEGTSKA ASIKGKKIYG KTGTSDGNKD LWFIGSIDNL TTGIWIGYDD NKESELSSGN AAYLWKKFIS EIYKIPIKK
|
| |