Gene P9301_04291 details

Gene Information

• Locus tag: P9301_04291
• Symbol: rpsD
• ID: 4911439
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Prochlorococcus marinus str. MIT 9301
• Kingdom: Bacteria
• Replicon accession: NC_009091
• Strand: -
• Start bp: 375598
• End bp: 376206
• Gene Length: 609 bp
• Protein Length: 202 aa
• Translation table: 11
• GC content: 39%
• IMG OID: 640160007
• Product: 30S ribosomal protein S4
• Protein accession: YP_001090653
• Protein GI: 126695767
• COG category: [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG0522] Ribosomal protein S4 and related proteins
• TIGRFAM ID: [TIGR01017] ribosomal protein S4, bacterial/organelle type

Plasmid Coverage information

• Num covering plasmid clones: 10
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTCAAGAT ACCGCGGCCC CAGATTAAGG GTTACGCGTC GCTTGGGAGA ACTACCAGGT 
CTCACCAGGA AAGCTTCAAA GAAGTCTAAT CCTCCAGGTC AGCACGGCCA AGCCCGTCGC 
AAGCGATCAG AATATGCAAT TCGTCTAGAA GAAAAGCAGA AACTTAGGTT TAATTATGGA 
GTTTCTGAAA AACAACTAGT ACGCTATGTG AAAAAAGCTA GAGCTCAAGA AGGATCTACA 
GGTACTAACC TACTAAGACT TTTAGAAAAC AGACTTGATA ATGTTTGTTT TAGATTAGGT 
TTTGGAGGTA CCATTCCAGG CTCAAGACAA TTAGTAAATC ATGGCCATGT AACCGTTAAT 
GGAAAGGTTC TTGATATTGC TGGTTATCAA TGCAAATCAG GCGATGTAAT CGGAATTAAA 
GAAAACAAAG CAAGCAAAAA ACTTGTAGAA GGTAATATAG AATTCCCTGG CTTAGCAAAT 
GTCCCACCTC ATCTTGATTT AGACAAGCCT AAATTAACGG GAAAAATAAA TGGGAAATGC 
GATAGAGAGT GGGTAGCTCT TGAAATAAAC GAACTACTAG TTGTTGAATA TTATTCAAGA 
AAAGTTTAA 

 

Protein sequence

MSRYRGPRLR VTRRLGELPG LTRKASKKSN PPGQHGQARR KRSEYAIRLE EKQKLRFNYG 
VSEKQLVRYV KKARAQEGST GTNLLRLLEN RLDNVCFRLG FGGTIPGSRQ LVNHGHVTVN 
GKVLDIAGYQ CKSGDVIGIK ENKASKKLVE GNIEFPGLAN VPPHLDLDKP KLTGKINGKC 
DREWVALEIN ELLVVEYYSR KV