| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | P9301_04241 |
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| Symbol | pdhC |
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| ID | 4911603 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Prochlorococcus marinus str. MIT 9301 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009091 |
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| Strand | + |
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| Start bp | 369312 |
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| End bp | 370679 |
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| Gene Length | 1368 bp |
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| Protein Length | 455 aa |
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| Translation table | 11 |
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| GC content | 37% |
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| IMG OID | 640160002 |
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| Product | branched-chain alpha-keto acid dehydrogenase subunit E2 |
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| Protein accession | YP_001090648 |
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| Protein GI | 126695762 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0508] Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase (E2) component, and related enzymes |
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| TIGRFAM ID | [TIGR01349] pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase, long form |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCTCACG AAATATTCAT GCCTGCCTTG AGTTCTACTA TGACGGAGGG CAAGATTGTG
GAATGGTTGA AAAATCCAGG AGATAAAGTT GAAAGAGGTG AATCTGTCTT GGTTGTTGAA
TCTGACAAGG CAGATATGGA TGTTGAATCT TTTCAAGATG GATATCTTGC GGCTGTTTTA
ATGCCTGCTG GCAGCACTGC ACCAGTGGGA GAGACTATTG GCCTTATCGT AGAAAATGAG
GATGAGATAG CTTCTGTTCA AGAACAAAAT AAAGGAAATC AACCCGAAGT TTCTAGTTCG
GATCAACTTG AATTGGTAAG CAATAAAACT GAAGAAAAAC CTGTAGTTCA AAGTGAAATT
GTTGAAAAAC AAGAAAAAGA AGTCGTATTA ATGAATGAAA AGGCAGCATC ATCTTTTAAC
AGTGATCAAA TAAATGCTGC TACGAGTAAT GTTTCTTCGA GGGTGATTGC ATCTCCAAGA
GCTAAAAAAC TTGCCTCTCA AATGGGTGTT GATTTAGCAA AGGTTCATGG ATCCGGACCT
CACGGAAGGA TTCAAGCCGA TGATATTTTA AAAGCTAATG GCCAACCAGT CTCTATACCA
TGGATAGGTG AAGGTGGTTC TCCTGCAAGT ATACCTGGTG CAAATTTGGG AGTTGAAAGT
AAACCAGAAA CTTCAGGAAA TAGTTTTGGT AATCCCGGAG AAATAGTTCA ATTTAATACT
CTTCAAAAAG CGGTAAATAA AAATATGGAA TCTAGTTTAG ATGTGCCATG TTTTAGGGTG
GGTTATTCCA TTAACACAGA TAAATTAGAT AATTTCTACA AAAAAGTAAA ACAGAACGGA
GTTACTATGA CTGCTTTACT AGTAAAGGCA GTTGCAAAGA CACTAAAGAA ACATCCTCAA
GTTAACTCAA GTTTTTCAGA GAATGGAATT TCTTATCCAG AAAATATAAA TATTGCTGTT
GCTGTTGCGA TGGAAGATGG TGGACTAATA ACTCCAGTTT TAAAAGAACC ATGCAATACT
GATTTATTTG AATTGTCTAG GGAATGGAAA GATCTCGTAA AAAGATCAAG ATCAAAACAA
TTAGAACCTG ATGAGTACTC TACGGGAACC TTCACTTTAT CTAACCTTGG GATGTTTGGA
GTTGATAGAT TTGACGCAAT TCTTCCTCCA GGTACCGGTG CAATTTTAGC CATAGCTTCA
TCGAAACCAA CCGTTGTTGC TAATAGTGAT GGTTCAATAT CTGTTAAAAA AATAATGCAA
GTAAATCTAA CAGCTGATCA TAGAGTGATC TATGGAGCTG ATGGAGCTTC ATTCTTAAAA
GACTTGGCTT CCCTAATTGA AGATGAGCCA GAGACTCTTG TCTCCTAA
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| Protein sequence | MSHEIFMPAL SSTMTEGKIV EWLKNPGDKV ERGESVLVVE SDKADMDVES FQDGYLAAVL
MPAGSTAPVG ETIGLIVENE DEIASVQEQN KGNQPEVSSS DQLELVSNKT EEKPVVQSEI
VEKQEKEVVL MNEKAASSFN SDQINAATSN VSSRVIASPR AKKLASQMGV DLAKVHGSGP
HGRIQADDIL KANGQPVSIP WIGEGGSPAS IPGANLGVES KPETSGNSFG NPGEIVQFNT
LQKAVNKNME SSLDVPCFRV GYSINTDKLD NFYKKVKQNG VTMTALLVKA VAKTLKKHPQ
VNSSFSENGI SYPENINIAV AVAMEDGGLI TPVLKEPCNT DLFELSREWK DLVKRSRSKQ
LEPDEYSTGT FTLSNLGMFG VDRFDAILPP GTGAILAIAS SKPTVVANSD GSISVKKIMQ
VNLTADHRVI YGADGASFLK DLASLIEDEP ETLVS
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