| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | P9301_04201 |
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| Symbol | lrtA |
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| ID | 4911599 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Prochlorococcus marinus str. MIT 9301 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009091 |
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| Strand | - |
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| Start bp | 365361 |
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| End bp | 365945 |
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| Gene Length | 585 bp |
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| Protein Length | 194 aa |
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| Translation table | 11 |
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| GC content | 29% |
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| IMG OID | 640159998 |
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| Product | light repressed protein A-like protein |
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| Protein accession | YP_001090644 |
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| Protein GI | 126695758 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1544] Ribosome-associated protein Y (PSrp-1) |
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| TIGRFAM ID | [TIGR00741] ribosomal subunit interface protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.016107 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAAAATTT TAATCCATGG AAAGAATCTT GAGCTCACTG GAGCATTAAA AGAATATACT
GAGGCAAAGA TAGAAAAAGC AACACATCAC TATAAGGATA TCGTTAAAGA AGCTGACATA
CACCTTTCAA TTGAAAAGAA TCCAAGAGTC TCGTTCCAAA CTGCGGAAGT TACTATTTTT
GCAAATGGTA CCGTAATTAG AGCTGAAGAA AAAACTGAAA ATCTATACTC AAGCATTGAT
TTAGTTTCAA ATAAACTTTG TAGAAAATTA CGCAAATACA AAGAAAGAAA CAATAAAACA
ATTCATAATA AACAATTTAA AAATAAAGAT TCTTTACCAA TTGAAAGTAT GGAATCAAAT
TTTTTAGATA AAGCTTTTTT TAAAGAAGGA ACTGAAGCAA GTCTGCCTGA ACCATCTATA
AAAAATAAAT ACTTTGAAAT GACCCCAATT TCATCAGACG AAGCAAGAAA ACAATTAGAT
CTAATTGATC ATGATTTTTA TGTTTTTCGA AACAAGAAAA ATAATGAACT TCAAGTTATA
TATAAAAGGA ATCATGGAGG TTATGGACTG ATTCAATCTA AATAA
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| Protein sequence | MKILIHGKNL ELTGALKEYT EAKIEKATHH YKDIVKEADI HLSIEKNPRV SFQTAEVTIF
ANGTVIRAEE KTENLYSSID LVSNKLCRKL RKYKERNNKT IHNKQFKNKD SLPIESMESN
FLDKAFFKEG TEASLPEPSI KNKYFEMTPI SSDEARKQLD LIDHDFYVFR NKKNNELQVI
YKRNHGGYGL IQSK
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