Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | P9301_03371 |
Symbol | rps1a |
ID | 4912480 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Prochlorococcus marinus str. MIT 9301 |
Kingdom | Bacteria |
Replicon accession | NC_009091 |
Strand | - |
Start bp | 308720 |
End bp | 309811 |
Gene Length | 1092 bp |
Protein Length | 363 aa |
Translation table | 11 |
GC content | 36% |
IMG OID | 640159907 |
Product | 30S ribosomal protein S1 |
Protein accession | YP_001090561 |
Protein GI | 126695675 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0539] Ribosomal protein S1 |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAACGAAA ATTCTTCTCA AACCATTAAA GAACTTTCTG AGAATCAAGA AATTAAAAAT TCGTCTGAGT TAGATAATGA TGCAGCCTCT CAAAATGAGG AGGATTTATC ATTCGAAAAG AGCGATATAC CTTCAGCAGA TTCTTCCTCT AGCAGAACAA ATACTGACTT TGACAATGCA GGATTTACAC AAGAAGAATT TGCATCACTT TTGGGTAAGT ATGACTATAA CTTTAAGCCT GGCGATCTAG TTAAAGGCAC CGTTTTTGCT CTAGAACCCA AAGGGGCCAT GATAGATATA GGGGCAAAAA CAGCTGCTTT TATGCCTGTT CAGGAGGTTT CAATAAATAG AGTTGAAGGA CTTAATGATG TTTTGCAGCC TTCTGAAAGT AGAGAATTTT TCATAATGAG CGAAGAAAAT GAAGATGGCC AATTAGCTCT CTCCATTAGA AGAATTGAAT ATCAAAGAGC ATGGGAAAGG GTTAGACAAC TCCAAAAAGA AGATGCCACT ATCTATTCTG AAGTTTTTGC AACAAACAGA GGCGGGGCAC TTGTTAGGGT AGAAGGTTTG AGAGGTTTTA TCCCAGGCTC ACATATAAGT GCTCGAAAAA TCAAAGATGA CTTAGAAGGT GAATATTTAC CTTTAAAGTT TCTTGAAGTT GATGAAGAGA GAAATAGATT AGTACTAAGT CATAGAAGAG CTTTGGTTGA GAAAAAGATG AACCGACTTG AGGTAGGAGA AGTTGTTGTT GGTAATGTAA AAGGTATTAA ACCTTATGGA GCTTTCATTG ATATTGGTGG AGTTAGTGGT CTATTGCACA TTTCTGAGAT TAGTCATGAA CATATTGAGA CTCCTCATAA TGTTTTAAAT GTGAATGACC AAATGAAAGT TATGATAATT GACCTTGATT CAGAAAGAGG ACGTATTTCA TTATCTACTA AAGCACTTGA GCCTGAACCA GGAGATATGC TAACTGACCC TCAAAAAGTT TTTAGTAAAG CTGAAGAAAT GGCTGCGAAA TACAAACAAA TGTTATTTGA ACAAACTGAC GATATTGAAG AGATTCCCAC AGCGTCAAAT GAAGCAGAAT AA
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Protein sequence | MNENSSQTIK ELSENQEIKN SSELDNDAAS QNEEDLSFEK SDIPSADSSS SRTNTDFDNA GFTQEEFASL LGKYDYNFKP GDLVKGTVFA LEPKGAMIDI GAKTAAFMPV QEVSINRVEG LNDVLQPSES REFFIMSEEN EDGQLALSIR RIEYQRAWER VRQLQKEDAT IYSEVFATNR GGALVRVEGL RGFIPGSHIS ARKIKDDLEG EYLPLKFLEV DEERNRLVLS HRRALVEKKM NRLEVGEVVV GNVKGIKPYG AFIDIGGVSG LLHISEISHE HIETPHNVLN VNDQMKVMII DLDSERGRIS LSTKALEPEP GDMLTDPQKV FSKAEEMAAK YKQMLFEQTD DIEEIPTASN EAE
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