Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | P9301_03171 |
Symbol | ndhK |
ID | 4912687 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Prochlorococcus marinus str. MIT 9301 |
Kingdom | Bacteria |
Replicon accession | NC_009091 |
Strand | - |
Start bp | 292640 |
End bp | 293374 |
Gene Length | 735 bp |
Protein Length | 244 aa |
Translation table | 11 |
GC content | 37% |
IMG OID | 640159886 |
Product | NADH dehydrogenase subunit B |
Protein accession | YP_001090541 |
Protein GI | 126695655 |
COG category | [C] Energy production and conversion |
COG ID | [COG0377] NADH:ubiquinone oxidoreductase 20 kD subunit and related Fe-S oxidoreductases |
TIGRFAM ID | [TIGR01957] NADH-quinone oxidoreductase, B subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGAATCCAC AATTATCCCC AAAAGCAATA AGAGAAATTC GAGAAGGGAC TTGCAACCCT CTTGGTGCAC CCCAAGTAAC TACAGATTTG AGCGAAAATA TTATATTGAC AAGCTTAGAC GATCTTCATA ATTGGGCTAG ACTAAGCAGT CTTTGGCCTC TCTTATACGG AACAGCTTGT TGTTTTATAG AATTTGCCGC CTTAATCGGA TCTAGATTTG ATTTTGATAG ATTTGGATTA GTACCTAGAA GCTCTCCAAG GCAAGCAGAT TTGCTAATAG TTGCTGGAAC AGTAACTATG AAGATGGCGC CAGCTCTAGT AAGACTTTAT GAGCAAATGC CTGAACCAAA ATATGTCATT GCGATGGGTG CATGCACAAT CACAGGAGGA ATGTTCAGCG CAGACTCTAC AACTGCTGTA AGAGGTGTTG ATAAATTGAT TCCTGTTGAT TTATACCTTC CAGGATGCCC ACCAAGACCA GAAGCAATTT TTGATGCAGT AATCAAATTA AGAAAAAAAG TTGGTAACGA ATCAATCTTA GAGCGCACAA AAACTGAACA AACCCACAGA TACATAACAT CTGATCATGA AATGAATCTT GTTTTCTCAG AAAATACAGG TGAATATCTA AATAAAACTT CAGCTAACTC CATTCCATCC TCCAAAAAAG AAAAAATAAC TGAACTACCT GATAATAATG AAAAAGCAGA AATTATTGAT ACTTTAGAAA ATTAA
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Protein sequence | MNPQLSPKAI REIREGTCNP LGAPQVTTDL SENIILTSLD DLHNWARLSS LWPLLYGTAC CFIEFAALIG SRFDFDRFGL VPRSSPRQAD LLIVAGTVTM KMAPALVRLY EQMPEPKYVI AMGACTITGG MFSADSTTAV RGVDKLIPVD LYLPGCPPRP EAIFDAVIKL RKKVGNESIL ERTKTEQTHR YITSDHEMNL VFSENTGEYL NKTSANSIPS SKKEKITELP DNNEKAEIID TLEN
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