Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | P9301_03041 |
Symbol | |
ID | 4911588 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Prochlorococcus marinus str. MIT 9301 |
Kingdom | Bacteria |
Replicon accession | NC_009091 |
Strand | - |
Start bp | 279199 |
End bp | 280683 |
Gene Length | 1485 bp |
Protein Length | 494 aa |
Translation table | 11 |
GC content | 33% |
IMG OID | 640159873 |
Product | retinal pigment epithelial membrane protein |
Protein accession | YP_001090528 |
Protein GI | 126695642 |
COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG3670] Lignostilbene-alpha,beta-dioxygenase and related enzymes |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGACTAATT TACAAGATAA AAAAATTGAT AAATTTAAAA GTTTTAACAA AGAAGATTGG TCAAGTGCAT ATCAAAATGT AGAAAAGGAG CTAACCAAGG AGCCTCTAAA AATTAGCAAA GGTAATAATA TTAAAAATTT AAATGGAACA TTATTAAGAA ATGGACCAGG AATATTAGAG AGAGGTGGGC AATGGGTTCA TCATCCATTT GATGGTGATG GAATGATAAC ATCCATAAAA TTCGAAAATG GTCAGCCATT CTTAACAAAT AGATTTGTTA AAACTCAAGG CTATTTAGAA GAAGAAAAAA TAAATAAATT TATTTATAGA GGTGTTTTTG GGACTCAAAA AAATGGAGGA ATTTTAAATA ATGCATTAGA TCTAAAATTC AAGAATATCG CCAATACTCA TGTTGTTAAA TTAGGAGATG AAATTCTCGC ATTATGGGAA GCAGCCGGTC CACATGCAAT GGATCCTGAT AGTCTTGACA CTATTGGTTT AACAACATTA AAAGGAGTAC TCAAGCCTAA CGAAGCCTTT AGTGCACATC CCAAAACAGA CCTAAACTCA AATACATCTT CAGAACTTTT AGTCACTTTT GGGGTACAAA CCGGGCCAAA AAGTACCATT AGATTAATGG AATTTGATAA TGCTGGTACA AATTCTGGAA AGCTCATCTT TGACAGAAAA GATACCTTTA ATGGCTTTGC ATTCCTTCAT GATTTCGCAA TCACAACTAA TTGGGCAATA TTTTTACAGA ATGCTATTGA TTTCAATCCT CTTCCATTTG TAATGGGTCA AAGAGGAGCA GCACAATGTC TAAAGTCAAA CCCAAATAAA AAGGCAAAGT TTTTTTTCAT CCCCAGAGAA AGTGGATTAT TTAGAGGACA GCCTCCTTTA ACAATAGATG CTCCAGAAGG ATTCGTTTTT CATCATGTAA ACGCATTTGA AAAAGATTCT AAAATCGTAT TAGATAGTAT TTTTTATGAT GATTTCCCAT CAGTTGGTCC AGACGAGAAT TTTAGGGATA TTGACTTTGA TAAATATCCA GAAGGAAAAC TGAAAAGATC AATTATCGAT CTAAAGACAA AAACTTGTGA ACTTGAAACT TTCAGTGAAC AATGTTGTGA ATTTGCTGTT GTTAATCCTA AAAACTTAGG ATTAAAAGCA ACTTTTAGTT GGATGGCAAG CACATCTCAA AAGCTGGGGA ACGCTCCACT TCAAGCAATA AAAAAAATAA ATTTAACTTC TAAAGAAGAG ATTTCTTGGT CAGCAGGTCC AAGTGGATTT GTAAGTGAAC CAATTATGGT TCCATCAGAA AACTCTTCAA AAGAAGATGA GGGATTTTTA TTTATACTTC TATGGAACGG AGAAAGAAGA GGAAGCGATT TAGTGATATT AGACGCAAAA GACTTAAAAG AATTAGCTGT TTATGAATTA CCCATTTCAA TTCCTCATGG ACTTCATGGA TCTTGGGTTA ATTGA
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Protein sequence | MTNLQDKKID KFKSFNKEDW SSAYQNVEKE LTKEPLKISK GNNIKNLNGT LLRNGPGILE RGGQWVHHPF DGDGMITSIK FENGQPFLTN RFVKTQGYLE EEKINKFIYR GVFGTQKNGG ILNNALDLKF KNIANTHVVK LGDEILALWE AAGPHAMDPD SLDTIGLTTL KGVLKPNEAF SAHPKTDLNS NTSSELLVTF GVQTGPKSTI RLMEFDNAGT NSGKLIFDRK DTFNGFAFLH DFAITTNWAI FLQNAIDFNP LPFVMGQRGA AQCLKSNPNK KAKFFFIPRE SGLFRGQPPL TIDAPEGFVF HHVNAFEKDS KIVLDSIFYD DFPSVGPDEN FRDIDFDKYP EGKLKRSIID LKTKTCELET FSEQCCEFAV VNPKNLGLKA TFSWMASTSQ KLGNAPLQAI KKINLTSKEE ISWSAGPSGF VSEPIMVPSE NSSKEDEGFL FILLWNGERR GSDLVILDAK DLKELAVYEL PISIPHGLHG SWVN
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