Gene P9301_02941 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagP9301_02941 
Symboltgt 
ID4912509 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProchlorococcus marinus str. MIT 9301 
KingdomBacteria 
Replicon accessionNC_009091 
Strand
Start bp270397 
End bp271515 
Gene Length1119 bp 
Protein Length372 aa 
Translation table11 
GC content34% 
IMG OID640159862 
Productqueuine tRNA-ribosyltransferase 
Protein accessionYP_001090518 
Protein GI126695632 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0343] Queuine/archaeosine tRNA-ribosyltransferase 
TIGRFAM ID[TIGR00430] tRNA-guanine transglycosylase, queuosine-34-forming
[TIGR00449] tRNA-guanine transglycosylases, various specificities 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.483841 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGTTTGAAT TTGAAATTAC ATCGGATTGC ATTAATACAG GGGCAAGAAC TGGTATATTT 
CATACACCAA ATGGTAAGGT AAATACCCCA AAATTTATGC CTGTGGGTAC TTTGGCAACG
GTTAAAGGAA TTTCATCTAA GCAGTTAATC TCTACAGGAT CAGAAATGAT TCTCTCAAAT
ACCTTTCATC TTCATTTACA ACCTGGAGAA AAATTAGTTA AGGCATCTGG TGGAATACAT
AAGTTCATGA ATTGGCCTAA ACCTATTCTT ACTGATTCAG GCGGATATCA AGTTTTTAGT
TTGGCCAAAT TAAATAATAT TTCTGATGAA GGAGTTGAAT TTAAAAATCC AAGAGATGGA
AGTCACGTAT TTTTATCACC TGAAAAAGTA ATAAAGATTC AAATGGATCT TGGATCGGAT
GTCGCAATGG CTTTTGATCA TTGTCCTCCG CATACAGCTA ACGAAAATGA TATTGAGGAC
TCTTTAGAAA GAACTCATTC ATGGTTGCAA AAATGTGTTG AGACTCATCA GAAATCCAAT
CAAGCATTAT TCGGTATAGT TCAAGGTGGA AAGTATCCGA GATTGAGAGA ATATAGCGCA
AAATATACAA GTTCTTTTGA TCTACCAGGA ATAGCAGTGG GAGGTGTAAG TGTTGGTGAG
GCAGTCGAAG AAATACATAG TGTAATTAAT TACGTCCCGA AATTCTTACC AATAAATAAA
CCAAGATATT TAATGGGAAT AGGCTCTTTA AAAGAAATTT CTTTAGCTGT TGCTAATGGA
TTCGATATAT TTGACTGTGT TTTGCCAACA AGACTAGGAA GACATGGGAC TGCATTTTTT
AATGATGAAA GATTGAATTT GCGAAATGCT CGATTTAAAA ATGACTTTTC TCCGATTGAC
AAAACTTGTA AATGCGAAAC CTGTAAATCC TATTCTCGAG CATATTTGCA TCATCTAATT
AGAAATGACG AAATATTAGG TCTTAGTCTC ATAAGTTTGC ATAATATTGC TCACTTAATA
AGATTTACCA ATGCAATTTC TACTGCAATT AGAGATAATT GTTTTACAAA TGATTTCGCT
CCTTGGAAAA CATCCTCTAT TGCTCACCAT ACGTGGTAA
 
Protein sequence
MFEFEITSDC INTGARTGIF HTPNGKVNTP KFMPVGTLAT VKGISSKQLI STGSEMILSN 
TFHLHLQPGE KLVKASGGIH KFMNWPKPIL TDSGGYQVFS LAKLNNISDE GVEFKNPRDG
SHVFLSPEKV IKIQMDLGSD VAMAFDHCPP HTANENDIED SLERTHSWLQ KCVETHQKSN
QALFGIVQGG KYPRLREYSA KYTSSFDLPG IAVGGVSVGE AVEEIHSVIN YVPKFLPINK
PRYLMGIGSL KEISLAVANG FDIFDCVLPT RLGRHGTAFF NDERLNLRNA RFKNDFSPID
KTCKCETCKS YSRAYLHHLI RNDEILGLSL ISLHNIAHLI RFTNAISTAI RDNCFTNDFA
PWKTSSIAHH TW