| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | P9301_02501 |
|---|
| Symbol | psbO |
|---|
| ID | 4911534 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Prochlorococcus marinus str. MIT 9301 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009091 |
|---|
| Strand | - |
|---|
| Start bp | 233907 |
|---|
| End bp | 234746 |
|---|
| Gene Length | 840 bp |
|---|
| Protein Length | 279 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 36% |
|---|
| IMG OID | 640159816 |
|---|
| Product | photosystem II manganese-stabilizing protein |
|---|
| Protein accession | YP_001090474 |
|---|
| Protein GI | 126695588 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.785756 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACCTTTA ATCTATCGTC ACAGAACTTT ACTGCAACTT TAATTATGAG AATTCGTTCT
TTCTTAGCTT TTGTTATTTC AATTTGTATA ACTTTTGCTT TCGTACCTGT TAAAACATTT
GCTTTTTCTG AAAGAGGAAA TGCACAATTC ACAGATGTTG TTAATACTGG AAAAGCTAAT
GATTGCCCTA CATTAGACTC ATCTCTTATC GGATCAATAT CTCTAAGTAA TGGAGATAGC
CTCAAAGGAA TATGCATGCA TCCAACAGAA GTTTATGTAA AAGTGCCAGG GACAAAACGA
AAAGCTGCAG AATTTGTTTC TACAAAAATT ATTAGTCCTA GAAATAACAC CACAGTGACA
GAAGTTTATG GAGATATAGA TTCAGGAACT TTCACCGAAA AAGGTGGTAT TGATTTTCAA
CTTATTACTG TATTAACCCC TGGTGGTTTA GAGGTACCAT TTGCATTCTC AGCAAAAGAT
CTTACTGCTG ATTTACCCTC ATCAATTCAG CCAGGCACTG AGGTTAGTGG CTCAACATTT
ACACCTAACT ACAGAACAGG TGATTTTCTA GATCCTAAGG CAAGAGCTAA AAATACTGGT
GTTGAATATG CTCAAGGTTT AGTTGCATTA GGAGGAGATG ACGAAGAACT TGCTAAAGAA
AATATCAAAG TTGATGTAAA CGGCACTGGC GTTATTACTC TTTCAATTAA CAATGTAGAT
TCTGACACAG ACGAATTTGC TGGTACTTTT GAAGCTATCC AACCTTCAGA TACAGACATG
GGATCAAAAG ATCCACTCGA TGTAAAAATA ATAGGAGAGC TTTACGGAAG AAAGGCATAA
|
|---|
| Protein sequence | MTFNLSSQNF TATLIMRIRS FLAFVISICI TFAFVPVKTF AFSERGNAQF TDVVNTGKAN
DCPTLDSSLI GSISLSNGDS LKGICMHPTE VYVKVPGTKR KAAEFVSTKI ISPRNNTTVT
EVYGDIDSGT FTEKGGIDFQ LITVLTPGGL EVPFAFSAKD LTADLPSSIQ PGTEVSGSTF
TPNYRTGDFL DPKARAKNTG VEYAQGLVAL GGDDEELAKE NIKVDVNGTG VITLSINNVD
SDTDEFAGTF EAIQPSDTDM GSKDPLDVKI IGELYGRKA
|
|---|
| |