| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | P9301_02111 |
|---|
| Symbol | spoT |
|---|
| ID | 4912087 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Prochlorococcus marinus str. MIT 9301 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009091 |
|---|
| Strand | - |
|---|
| Start bp | 193714 |
|---|
| End bp | 196023 |
|---|
| Gene Length | 2310 bp |
|---|
| Protein Length | 769 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 34% |
|---|
| IMG OID | 640159777 |
|---|
| Product | guanosine-3',5'-bis(diphosphate) 3'-diphosphatase, (ppGpp)ase |
|---|
| Protein accession | YP_001090435 |
|---|
| Protein GI | 126695549 |
|---|
| COG category | [K] Transcription
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG0317] Guanosine polyphosphate pyrophosphohydrolases/synthetases |
|---|
| TIGRFAM ID | [TIGR00691] (p)ppGpp synthetase, RelA/SpoT family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 0 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCCGAGG CAGCTGCAAA TTCAAAAGAA AAAAACGAAA TTGAAGTTTC CAAAACTATT
TTGCCTGAAA ATAAAAAATA TGAAAGTGAA TCTTTGAATT ATCAAATAAA CATTCCCGAT
TGGCTTCTTA AAGATATTCA TAATTTTGAA AAATCAAATA AAGAAAATGA TGAAAATCAA
AACCTTATAG TAAAGGCTTT TAAACTTGCT TATAAAGCTC ATGATGGACA ATTCCGCGCG
AGCGGCGAGC CATACATTAT CCACCCGGTT GCTGTTGCAA ATCTCCTTAA AGAAATAGGT
GCTAGTTCAT CTGTTATTGC TGCAGGCCTT TTACATGATG TAGTTGAAGA TACTGGCATT
GATTTATCCG AAATAGAAAC AAATTTTGGA TTAGAAGTAA AAATACTTGT AGAGGGTGTA
ACAAAATTAG GCGGCATTCA CTTTAACAAC AGGACTGAAG CACAAGCTGA AAATCTTAGG
AAAATGTTTT TGGCTATGGC CAGCGATATC AGAGTTGTTT TAGTAAAACT TGCAGATCGA
CTTCATAACA TGAGAACAAT TGAATGGCTA AATGATGAGA AAAAACTAAG AATAGCGAGA
GAAACAAGAG AGATTTATGC GCCATTAGCA AATCGACTAG GAATAAACAG ATTTAAATGG
GAATTAGAAG ATTTAGCTTT TAAATTCCTA GAACCGAAAG AATATCTAGA TCTTAAAGAT
CAAATCGCCG TTAAAAGAAG TGATAGAGAA AAAAGATTAA AAGTAACTTT GAATCTTATG
AAGGAAAACT TGATTTCAGC AGGTTTGAAA AATTTTGAAA TAACAGGAAG GCCAAAACAT
CTTTATGGCA TCTGGAGCAA AATGGAAAGA CAGCAAAAGC ATTTTCACGA GATTTATGAT
GTTGCTGCCC TAAGAATTAT CGTGGACAAT TCAGATAGTT GTTATAGAGC TTTAGCAGTT
GTTCATGATA CTTTTAAACC AATTCCAGGT AGATTTAAAG ACTATATAGG ATTACCAAAG
CCCAATGGAT ATCAGTCCTT ACACACTTCT GTGATTGGAA GACATCGACC TATTGAAGTT
CAAATTAGAA CTACTTCAAT GCATCAAATT GCTGAATATG GTATTGCCGC TCATTGGCAA
TACAAAGAGG GTGGTTCTCC TGCTAAAAGT AATGCCGAGA GATTTAATTG GCTAAGACAA
TTAGTAGAAT GGCAACAAGA AGGCAATGAA AGGGATCATA ATGATTACCT AGCTTCAATA
AAAGAAGATT TATTTGATGA AGAAGTATTT GTGATCACTC CAAAAGGAGA TGTTGTTGGT
TTAAGGAAAG GATCTACCGC GATAGATTTC GCCTACAGAA TTCATTCTGA AGTTGGAAAT
CACTGTAATG GAATAAGAAT TAATGAAAAG CTTTCTCCAT TATCTACAGC ACTTCAAAAT
GGTGACTTCA TAGAAATTTT AACAAGTAAT AATTCTACTC CAAGCTTGGA TTGGCTGAAC
TTTGTAGTAA CGCCAACTGC TAAAAATAGA ATTCGCCAAT GGTATAAGAA AAGCCATCGT
GATGAAACGA TTAAAAGAGG TAGAGATTTA CTTGAAAAAG AAGTAGGTAA AAACGGTTTT
GAAGCATTAC TTTCTAGTGA AGCCATGAAA AAAGTTGCAA ATCGATGCAA TTTAAAAACT
ACTGAAGACC TTCTTGCATC TCTTGGTTTT GGTGGTTTAA CTTTGCATCA AGTATTAAAC
AGACTAAGAG AAGAAATAAA ATTACAGACA GAAGATGTAA AAAATGATTC TGACTCTGAA
ATAGCAAAAT CTCTTAAAAG TAATAATAAT TTATCCACTA ATCAACCTAA TACAGCAGCT
AAATCACCAA TTTCCGGGAT AGAAGGTCTT GATTACAGAA TAGGTAAATG CTGTTCCCCA
CTCCCAGGCG AGGATATTAT CGGAACTGTG TCGCTCGGCA ACCATGGGAT AACTATACAT
AGGGAAGATT GTGAAAATGT AATACCAATT CCAATAGAGA GAAGATTACC TGTCGGTTGG
AATCAAGATA ATAAAACTGG CGATAATAAG TTTCCAATTC AGCTACGAAT AGAAGTAATT
GATCGAGTTG GAGTTCTTAA AGATATTCTT ATGCGGTTAT CTGATAAAGG TATAAACGTT
AGCGATGCCA ATGTTAAAAC TGCTTATGGT AAACCAGCTA TTATAAATCT TTGTGTAGGT
CTTGAAAGTT ATAATCAACT TCACAAAACA ATTGAACAAA TTAAATCAAT GGCAGATGTT
TTAGATATTG CCAGAGTTGG ACAAAGTTAA
|
|---|
| Protein sequence | MSEAAANSKE KNEIEVSKTI LPENKKYESE SLNYQINIPD WLLKDIHNFE KSNKENDENQ
NLIVKAFKLA YKAHDGQFRA SGEPYIIHPV AVANLLKEIG ASSSVIAAGL LHDVVEDTGI
DLSEIETNFG LEVKILVEGV TKLGGIHFNN RTEAQAENLR KMFLAMASDI RVVLVKLADR
LHNMRTIEWL NDEKKLRIAR ETREIYAPLA NRLGINRFKW ELEDLAFKFL EPKEYLDLKD
QIAVKRSDRE KRLKVTLNLM KENLISAGLK NFEITGRPKH LYGIWSKMER QQKHFHEIYD
VAALRIIVDN SDSCYRALAV VHDTFKPIPG RFKDYIGLPK PNGYQSLHTS VIGRHRPIEV
QIRTTSMHQI AEYGIAAHWQ YKEGGSPAKS NAERFNWLRQ LVEWQQEGNE RDHNDYLASI
KEDLFDEEVF VITPKGDVVG LRKGSTAIDF AYRIHSEVGN HCNGIRINEK LSPLSTALQN
GDFIEILTSN NSTPSLDWLN FVVTPTAKNR IRQWYKKSHR DETIKRGRDL LEKEVGKNGF
EALLSSEAMK KVANRCNLKT TEDLLASLGF GGLTLHQVLN RLREEIKLQT EDVKNDSDSE
IAKSLKSNNN LSTNQPNTAA KSPISGIEGL DYRIGKCCSP LPGEDIIGTV SLGNHGITIH
REDCENVIPI PIERRLPVGW NQDNKTGDNK FPIQLRIEVI DRVGVLKDIL MRLSDKGINV
SDANVKTAYG KPAIINLCVG LESYNQLHKT IEQIKSMADV LDIARVGQS
|
|---|
| |