| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | P9301_02091 |
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| Symbol | trmE |
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| ID | 4912085 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Prochlorococcus marinus str. MIT 9301 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009091 |
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| Strand | - |
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| Start bp | 191803 |
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| End bp | 193185 |
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| Gene Length | 1383 bp |
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| Protein Length | 460 aa |
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| Translation table | 11 |
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| GC content | 27% |
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| IMG OID | 640159775 |
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| Product | tRNA modification GTPase TrmE |
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| Protein accession | YP_001090433 |
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| Protein GI | 126695547 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0486] Predicted GTPase |
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| TIGRFAM ID | [TIGR00231] small GTP-binding protein domain
[TIGR00450] tRNA modification GTPase TrmE |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.146144 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGATTCGA TAGTTACTAC AGAAGATACG ATAGCCGCAA TTGCTTCAGC TATAAGTATT
GGGAAGGGAG GAGTTGCGAT AATAAGAGTA TCAGGGAAAG ACGCAATAAA TTCTTGCAAA
AAGATTGTTC AAACTAAATC TAAATATGCA TGGGAATCAC ATAGGGTTTT TCGTGGTTTT
ATTCAGGAAA ATAAACAAAA TAAATTTATA GATGAAGTTT TAATTTTAGT GATGAAATCA
CCAAATAGCT TCACAGGAGA GGATGTCGTT GAACTTCATT GTCATGGCGG GATTATCATA
GTAAATAAAG TTTTAAAGAT ATTATTATCT AGTAATTCTA GAGTTAGAAT TGCAAACCCA
GGAGAATTTA GTCAAAGAGC TTTTCTTAAT GGGAAAATAG ACCTTACTCA AGCCGAGTCG
ATTAATCAAT TAATTAATGC AAGCAATACC AGATCAGCAG AGTTAGCCTT TAGCGGAATT
CAAGGAGAAA TAAAGAAAAA AATTGATGAT ATTAAAAATG ACCTTATAAA TCAACTTTGC
GAAATAGAAG CGAGAGTTGA TTTTGAAGAA GACTTCACAG ATTTTGATTA CACCAAATAT
CTAAAAAACA TTAAAAAAGT CAAAGAAAAA ATAGAATTAC TAATTGAAAA TGCAAAAAGA
AATTCATATA TTCACAATGG GATATCCATT GCGCTTATAG GTAAAACAAA TGTTGGTAAA
AGCTCTTTAT TAAATTTGCT TGCAAAAAAA GAGAAAGCAA TCGTAACTAA TATTCCTGGA
ACAACTAGAG ATGTTATTGA AGTTAATTTA ACTATTAATG ATATTCCAAT GAAAATAATT
GATACTGCTG GCATAAGAGA AACTTATGAA CAAATTGAAA GTATTGGAAT TAAAAAAAGT
TTTGGGAAAA TAAAAGAGTC AGATTTTATA ATTTATATTT ATAGTCTTGA AGAAGGATTT
AATGAAGAAG ACAAAAAAAT AATACAAGAA ATCCCCAAAG AAAAATTAAT TACTATTTTG
GGCAATAAAA AAGATTTAAT TGATTGCAAA AATATTAATT CAAATGAGCT AAAAAACACA
ATTCTTATGA GTATTAAGAA TAATGATGGT GAAAAATTAT TAATAGACAC AATCATAAAA
AAATGCGGAT TAAAACAAGT AGAAAATATT AATATATTTT TAAACGAAAG ACATCAAACA
AATTTGTCTG CTTGCTTATC TAATTTAAAT GATACTGATG AAATAATTGA AAATAAATTG
CCATTTGATT TGTTATCAAT TGAACTGAGA GATGGAATTC AAAACTTATC TAAAATAACT
GGTCAAGAAT TAACAGAGGA ACTTCTAGAT AATATTTTTT CTAAGTTTTG TATTGGCAAA
TAA
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| Protein sequence | MDSIVTTEDT IAAIASAISI GKGGVAIIRV SGKDAINSCK KIVQTKSKYA WESHRVFRGF
IQENKQNKFI DEVLILVMKS PNSFTGEDVV ELHCHGGIII VNKVLKILLS SNSRVRIANP
GEFSQRAFLN GKIDLTQAES INQLINASNT RSAELAFSGI QGEIKKKIDD IKNDLINQLC
EIEARVDFEE DFTDFDYTKY LKNIKKVKEK IELLIENAKR NSYIHNGISI ALIGKTNVGK
SSLLNLLAKK EKAIVTNIPG TTRDVIEVNL TINDIPMKII DTAGIRETYE QIESIGIKKS
FGKIKESDFI IYIYSLEEGF NEEDKKIIQE IPKEKLITIL GNKKDLIDCK NINSNELKNT
ILMSIKNNDG EKLLIDTIIK KCGLKQVENI NIFLNERHQT NLSACLSNLN DTDEIIENKL
PFDLLSIELR DGIQNLSKIT GQELTEELLD NIFSKFCIGK
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