| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | P9301_01661 |
|---|
| Symbol | rbcR |
|---|
| ID | 4912568 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Prochlorococcus marinus str. MIT 9301 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009091 |
|---|
| Strand | - |
|---|
| Start bp | 153696 |
|---|
| End bp | 154640 |
|---|
| Gene Length | 945 bp |
|---|
| Protein Length | 314 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 35% |
|---|
| IMG OID | 640159732 |
|---|
| Product | putative Rubisco transcriptional regulator |
|---|
| Protein accession | YP_001090390 |
|---|
| Protein GI | 126695504 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG0583] Transcriptional regulator |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCCAGAAT TACCATTTAC ACTCGACCAA TTAAGAATAT TAAAAGCTAT AGCAGCTCAA
GGAAGTTTTA AAAAAGCTGC AGATATCTTA TATGTAACCC AACCTGCCGT AAGTTTACAA
ATACAAAATT TAGAAAAACA ACTTGAAATC ACAATTTTCG ACAGAGGTGG TAGGAAGGCT
CTTTTGACTG AAGCAGGGAG ACTATTGCTT GAATATTGTG AACGAATTTT GAATCAATGC
GACGAAGCTT GCAAAGCTAT TGAAGATTTA AATAGCTTAA AAGGTGGAAC TCTTGTCATT
GGAGCGAGCC AAACAACGGG TACCTATTTA ATGCCGAGAA TGATAGGACT ATTCAGACAA
AAATACCCTG ATGTATCAGT TCAACTTCAA GTTCACAGTA CAAGAAGAAC TGGTTGGAGT
GTGGCCAATG GACAAATTGA CTTAGCCATT ATTGGCGGAC AATTACCTGG AGATTTGGAA
AATTTGCTAC AAGTAATTCC ATATGCCACT GATGAATTGG CATTAGTTTT ACCATCTAAA
CATCAACTTT CGACTAAAAA AGAGCTTCTA AAAGAAGACT TATACAAATT AAATTTTGTA
ACTTTAGACT CACAATCTAC AACGAGAAAA GTTGTTGACA AACTTCTCCA AGATTCTGGG
CTTGATATTC AAAGATTAAA AATTGAGATG GAACTTAACT CTCTTGAAGC AATCAAGAAT
GCAGTTCAAT CAGGTTTGGG AGCTTCCTTT TTGCCTGTTG TTTCTATTGA AAGAGAATTA
TCGGCTGGAA CAATCCACAA AGCATTCGTT GCTGATTTAG AGGTAAAAAG AGAACTTAAA
TTAATTACTA ATCCGTCAAG ATATACATCA AGAGCATCAG AAGTATTTAA GAAAAACATT
CTTCCACAAT TTGCTAGTTT AGAAAGCCCT TTGAGGTATT TATAA
|
|---|
| Protein sequence | MPELPFTLDQ LRILKAIAAQ GSFKKAADIL YVTQPAVSLQ IQNLEKQLEI TIFDRGGRKA
LLTEAGRLLL EYCERILNQC DEACKAIEDL NSLKGGTLVI GASQTTGTYL MPRMIGLFRQ
KYPDVSVQLQ VHSTRRTGWS VANGQIDLAI IGGQLPGDLE NLLQVIPYAT DELALVLPSK
HQLSTKKELL KEDLYKLNFV TLDSQSTTRK VVDKLLQDSG LDIQRLKIEM ELNSLEAIKN
AVQSGLGASF LPVVSIEREL SAGTIHKAFV ADLEVKRELK LITNPSRYTS RASEVFKKNI
LPQFASLESP LRYL
|
|---|
| |