Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | P9301_01601 |
Symbol | |
ID | 4912708 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Prochlorococcus marinus str. MIT 9301 |
Kingdom | Bacteria |
Replicon accession | NC_009091 |
Strand | + |
Start bp | 148586 |
End bp | 149803 |
Gene Length | 1218 bp |
Protein Length | 405 aa |
Translation table | 11 |
GC content | 26% |
IMG OID | 640159726 |
Product | poly A polymerase family protein |
Protein accession | YP_001090384 |
Protein GI | 126695498 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0617] tRNA nucleotidyltransferase/poly(A) polymerase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 2 |
Plasmid unclonability p-value | 0.100479 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAAAAATA GCGTTCTCAC AGATCATACA CTAATTATTG ATGAATTAGA AAAAAGTATA AAATTTCATA ATTTGAATTT TATATTAGGT TTTTTACCTA AAGGATCATA TTTGGTTGGC GGTTACATAA GGGATATTAT TTTAGGAAGA AAAACTGAAA AGCTAGATGT TGATATTGTG GTACCTTTAA AAGCAATTGA AATTGGGAAA AAGATTGCAG AAAATATTGA ATCAAAATTT ATAGTTTTAG ATGAAAAAAG AGAAGTAGTA AGAATTTTTC TTAATAATAT TGATATTGAT ATTGCTAATC AAGTTTCATC TACGATAGAA GGAGATTTGT TTTCTAGAGA CTTTTCGATT AATTCAATTG CTTTTTTATT AGATAAGAAA TGTTTGTTAG ATCCATTAAA TGGTCTTAAA GATCTAGAGA TTTCTTTGCT TAGAAGTCAT TCTGAAAAAA ATTTACTGAA TGATCCTTTG CGAATATTAA GATGTTTTCG ATTTGTTTCG GAATTGAATT TTAAAATTGA TCTTAATTTA ATTACTTTTA TAAAAAAAAA TAAAGTGAAA TTATATATTG CTGCTAAAGA GAGAATTAAT TATGAAATAC AGAAAATAGT TAATGGAGCG AATGCTCTTG AGGCAGTATT GCTGATAAAA AAATTAAATA TATTTGGTAT TGATAATTTA TTTGAAGATT CTTTTTTTTT GGATTTAGAG AAAATTAATT ATGCAGAACT TAATCAGGAA GAAAAAGAAA AATTTTTACC ATCATTTTTT ATTGCTCAAA TTTTAGATGT TGTATCTCTA GAGAAACTTA AATTTAGTAA AGCTGAAATT TCAAAAACTA AGTTATTACG AAAATGGCAT TTTTTGTTGG AGAAAAAAAA TATCTCTCAA TTAACTGAAG CAGAAAGATT TGCATTACAT AAAGAATTAG AGATGTTTCT TCCATTATTT ATTTTTTATT TACCTCAAAA CTCTCGATTA GATTGGCTTC ATAGATGGCG TGACAACAAT GATAAATTAT TCCATCCTTC AAACTTACTT AATGGTGATG TAATTAAAAA AAATTTAAAA ATAAAGGATG GGCCTATCTT AGGAGAGCTT TTACAGTATC TTTCGAAAGA ACTTGCGTAT AAAAGATTGA ATAATTTTGA TGAAGCTATT TATAAAGCAA AGCGATGGAT TGAACAAAAT GCGCCAAAAT GTGATTAA
|
Protein sequence | MKNSVLTDHT LIIDELEKSI KFHNLNFILG FLPKGSYLVG GYIRDIILGR KTEKLDVDIV VPLKAIEIGK KIAENIESKF IVLDEKREVV RIFLNNIDID IANQVSSTIE GDLFSRDFSI NSIAFLLDKK CLLDPLNGLK DLEISLLRSH SEKNLLNDPL RILRCFRFVS ELNFKIDLNL ITFIKKNKVK LYIAAKERIN YEIQKIVNGA NALEAVLLIK KLNIFGIDNL FEDSFFLDLE KINYAELNQE EKEKFLPSFF IAQILDVVSL EKLKFSKAEI SKTKLLRKWH FLLEKKNISQ LTEAERFALH KELEMFLPLF IFYLPQNSRL DWLHRWRDNN DKLFHPSNLL NGDVIKKNLK IKDGPILGEL LQYLSKELAY KRLNNFDEAI YKAKRWIEQN APKCD
|
| |