Gene P9301_01511 details

Gene Information

• Locus tag: P9301_01511
• ID: 4912699
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Prochlorococcus marinus str. MIT 9301
• Kingdom: Bacteria
• Replicon accession: NC_009091
• Strand: +
• Start bp: 140903
• End bp: 141424
• Gene Length: 522 bp
• Protein Length: 173 aa
• Translation table: 11
• GC content: 33%
• IMG OID: 640159717
• Product: photosystem I assembly protein Ycf3
• Protein accession: YP_001090375
• Protein GI: 126695489
• COG category: [N] Cell motility; [U] Intracellular trafficking, secretion, and vesicular transport
• COG ID: [COG3063] Tfp pilus assembly protein PilF

Plasmid Coverage information

• Num covering plasmid clones: 5
• Plasmid unclonability p-value: 0.0614033
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGCCTAGTA ATCAAAACAG AGACAATTTT ATCGATAAAG CTTTTACAGT AATTGCTGAA 
TCAATAGTAA AAATAATGCC TATTGCAGAG AAAGAAAAAA AAGCATATAT CTACTATAGA 
GATGGCCTAG CTGCACAAAA TAATGGGGAT TATTCGGAAG CATTAGAGTA TTACAAAGAG 
AGTTTACTAC TTGAAGAAAA TAAAATTGAT AGGGGTGAGA CTTTAAAAAA TATGGCGATA 
ATATACATGA GCAATGGTGA AGAAGATCTG TCTATTGAAA CTTATGAAAA AGCATTAGTA 
GAAAATCCCA AACAGCCATC ATGCCTTAAA AATATAGGTT TGATTTATGA AAAAAGGGGA 
AGAAATGCTG AGCAGAATGG TGATTTAGAC CAGAGAGATA TTTGGTTTGA TAAAGCTGCA 
GAAGTCTGGT CTAAAGCAGT AAGATTATAC CCAGGTGGTT ATCTAGACAT AGAGAATTGG 
TTGAAAAACT CAGGAAGAAG TTCAATCGAT ATGTATCTCT AA 

 

Protein sequence

MPSNQNRDNF IDKAFTVIAE SIVKIMPIAE KEKKAYIYYR DGLAAQNNGD YSEALEYYKE 
SLLLEENKID RGETLKNMAI IYMSNGEEDL SIETYEKALV ENPKQPSCLK NIGLIYEKRG 
RNAEQNGDLD QRDIWFDKAA EVWSKAVRLY PGGYLDIENW LKNSGRSSID MYL