Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | P9301_00271 |
Symbol | pdxA |
ID | 4912280 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Prochlorococcus marinus str. MIT 9301 |
Kingdom | Bacteria |
Replicon accession | NC_009091 |
Strand | - |
Start bp | 28350 |
End bp | 29339 |
Gene Length | 990 bp |
Protein Length | 329 aa |
Translation table | 11 |
GC content | 34% |
IMG OID | 640159591 |
Product | 4-hydroxythreonine-4-phosphate dehydrogenase |
Protein accession | YP_001090251 |
Protein GI | 126695365 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG1995] Pyridoxal phosphate biosynthesis protein |
TIGRFAM ID | [TIGR00557] 4-hydroxythreonine-4-phosphate dehydrogenase |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.204744 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGGGAGATG AGTCAGGTAT TGGACCCGAA ATAATCTTAA AAGCACTTTG TTCAAATGAG ATACCAAAAA ATATTGAATT TAAATTAGTT GGATCAGAAA AAAACCTACA TGATACATAT GAACACCTTA GATCCTTAGG ATTGGAAAGC CTTGCAAATC CCAAAAATTT AAAGATACAT GATCTCGAAG TTTCTTCAAC AAATAATAAC TCTAAATCAA GTTACGGTGA TTCAAGTTTC CAATATTTAA AAAAAGCAAT AGAAATTGTA AAACAATATC CCGATTCAGC ACTTGTAACT GGACCAATTT GCAAGAAATC ATGGTCCTTA GCAGGTCATG ACTTCACGGG TCAAACTGAA GTACTAGCAA AATCATGTGG GGTAAAAAAC GTTGGAATGT TATTCACAGC AAAATCACCA ATTACAGGTT GGAGATTTAA TACTCTACTA GCAACAACCC ACATAGCACT TTGTGAAGTT TCCAAAAAAT TAAATACAGA ATTAATCCAC TCTAAATTAG ATCTTTTTAA AGATTTTTGT AATACCTATA ATGATAAACC GACTTTAAAA GTAGCAGGAT TAAACCCTCA TGCCGGCGAG GAAGGTATTT TAGGACATGA AGAAAAAGAT TGGCTCAATG ATGCATTAAT TACATGGTCA AAAAAAAATA GAAACATTAA ATTATTAGGC CCTTTATCAC CAGATAGTTG CTGGAATTCT TCCGTAAAAG CCTGGAGTGA CAAAAATGCT GAAAAACATG ATGGCATTCT TGCTATGTAT CATGATCAAG GTTTAATACC AATGAAAGTG ATAGCCCTTA ATTACTCAGT AAACACCACA ATCGGTTTAC CTTTTATAAG AACATCTCCA GATCATGGAA CAGGATTTGA TATTGCTGGC AAAGGAGTTG CTCAATCTCA GAGCATGATT GAGGCGATAA AGGCCGCTGT AGAAATTACT AACAATTCAA GACTGCTTTA CACGCATTAA
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Protein sequence | MGDESGIGPE IILKALCSNE IPKNIEFKLV GSEKNLHDTY EHLRSLGLES LANPKNLKIH DLEVSSTNNN SKSSYGDSSF QYLKKAIEIV KQYPDSALVT GPICKKSWSL AGHDFTGQTE VLAKSCGVKN VGMLFTAKSP ITGWRFNTLL ATTHIALCEV SKKLNTELIH SKLDLFKDFC NTYNDKPTLK VAGLNPHAGE EGILGHEEKD WLNDALITWS KKNRNIKLLG PLSPDSCWNS SVKAWSDKNA EKHDGILAMY HDQGLIPMKV IALNYSVNTT IGLPFIRTSP DHGTGFDIAG KGVAQSQSMI EAIKAAVEIT NNSRLLYTH
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