| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | P9301_00101 |
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| Symbol | rsbU |
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| ID | 4912356 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Prochlorococcus marinus str. MIT 9301 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009091 |
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| Strand | + |
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| Start bp | 13171 |
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| End bp | 14514 |
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| Gene Length | 1344 bp |
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| Protein Length | 447 aa |
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| Translation table | 11 |
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| GC content | 28% |
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| IMG OID | 640159574 |
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| Product | protein phosphatase 2C domain-containing protein |
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| Protein accession | YP_001090234 |
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| Protein GI | 126695348 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG2208] Serine phosphatase RsbU, regulator of sigma subunit |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.0928709 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGACAAATA ATCAAAAAGA AAAAATATTT TCGAACAAAT TTATTCAACA ATTTTTAGAT
AATGAATCCA ACTTAACTTT AAAAAATAAT TATAAATTTG ATGAAATTGC TTCTTCATTA
GCATATTATT TAAAATCATT TTCCAACATA AATAAGTTAC TTGATTATGT ATGTTTAATT
TTTAAACATA TTTTTTCTGA GAATATAATC TTAATTATTC CTTTAAATTA TGAGGGGGAG
ATATGGAACG AAAATATAAA AATTTCCGAT AATGATCAAT TTTTTACAAC TTTAGAGAAA
ATTAATGGTT TTTTGAATAA ATTTAATTTT TCAAAAAATT TTAAAATAAA AGATATTCAT
ACTTTTGAAA ATACTTTAAA AAATAACTTT AAAGAATATA AAATTGAAAC TAAAAAAATA
CTATCTAGAG GTAAATGTAG AGGATTTATA TATATTTTTA GCAAAGATAT TTCTGGCCCG
TCGATTACTG AGGATAGTTA TTTTAATTTT GTTGAGAATT GTCTAGCGGT TGGATTAGAA
AATCACTTCT TAATAAAAAC AAAAAAAAAG CATGAAAACG TAGATAGAGA AATTTCTACC
GGTGCTGAAA TTCAATCTCA ATTACTCCCG GAGTATTGTC CAACTATCCA TGGTTTAGAC
CTCGCGGCTC ACTGCAGACC AGCTCTCCAG CTTGGTGGGG ATTACTATGA TTTTATGTGC
TTAAAGACAA ATATTTCTGA AAAAAGAAAA GAAAAATCAA GATGGGCTTT TGTAATAGGT
GATGTCATGG GTAAAGGTAT TCCTGCCGGT CTTTTAATGA CTATGTTAAG AGGAATGCTA
CGTGCAGAGG TTCTTACAGG TCTGCCTCCA GATAGAATTT TGTATGATTT GAATCAACTA
GCAATAAATG ATTTAGATCA ATCGCATAGA TTTGTGACAT TATTTTATTC AGATTATGAC
CCTAGAACTA GAAAATTAAG ATTCGCTAAT GCAGCACATA ATCCTCCTTT GCTTTGGAAA
AATTCAGATC AGAAAATTAT AAAATTAGAT GCAGAGGGAT TTGTACTTGG ACTACAAAAA
GATGCTGAAT ATCATTGTGG TGAAATTAAG CTTAATGACA ATGATCTAGT TTTTTATTAT
ACAGATGGAG TAATTGATAC TTCTAATTCT TTAGGGCAAA GATTTGATGA GGAAAGGTTA
ATTAAAACAC TTGCAAAATT ATGCAAGCAA TCTTATACAT CTCAAGAAAT TTTAAATAAA
ATATTCAAAA AGTTAGATGA TTTTACAGGT CAAAATAGAC ATCTGGAAGA TGATGCAACG
ATGGTAATTT TTCAATTGAA ATAG
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| Protein sequence | MTNNQKEKIF SNKFIQQFLD NESNLTLKNN YKFDEIASSL AYYLKSFSNI NKLLDYVCLI
FKHIFSENII LIIPLNYEGE IWNENIKISD NDQFFTTLEK INGFLNKFNF SKNFKIKDIH
TFENTLKNNF KEYKIETKKI LSRGKCRGFI YIFSKDISGP SITEDSYFNF VENCLAVGLE
NHFLIKTKKK HENVDREIST GAEIQSQLLP EYCPTIHGLD LAAHCRPALQ LGGDYYDFMC
LKTNISEKRK EKSRWAFVIG DVMGKGIPAG LLMTMLRGML RAEVLTGLPP DRILYDLNQL
AINDLDQSHR FVTLFYSDYD PRTRKLRFAN AAHNPPLLWK NSDQKIIKLD AEGFVLGLQK
DAEYHCGEIK LNDNDLVFYY TDGVIDTSNS LGQRFDEERL IKTLAKLCKQ SYTSQEILNK
IFKKLDDFTG QNRHLEDDAT MVIFQLK
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