Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BMA10247_3503 |
Symbol | rpsD |
ID | 4894932 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia mallei NCTC 10247 |
Kingdom | Bacteria |
Replicon accession | NC_009080 |
Strand | + |
Start bp | 3441969 |
End bp | 3442592 |
Gene Length | 624 bp |
Protein Length | 207 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 640152150 |
Product | 30S ribosomal protein S4 |
Protein accession | YP_001083015 |
Protein GI | 126448998 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0522] Ribosomal protein S4 and related proteins |
TIGRFAM ID | [TIGR01017] ribosomal protein S4, bacterial/organelle type |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.535804 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | GTGGCACGTT ATATCGGCCC CAAAGCCAAG CTGTCCCGCC GTGAAGGCAC CGATCTGTTC CTGAAGAGCG CACGCCGCTC GCTCGCCGAC AAGTGCAAGC TCGACAGCAA GCCGGGTCAG CACGGCCGCA TCTCCGGTGC GCGCACGTCG GACTACGGCA CGCAGCTGCG CGAGAAACAG AAGGTCAAGC GCATTTACGG TGTGCTGGAG CGCCAGTTCC GCCGCTACTT CGCTGAAGCC GACCGCCGCA AGGGCAACAC GGGTGAAACC CTGCTGCAAT TGCTCGAGTC GCGTCTCGAC AACGTCGTGT ACCGCATGGG CTTCGGCTCG ACCCGCGCTG AAGCGCGTCA GCTCGTGAGC CACAAGGCGA TCACCGTCAA CGGCATCGTC GCGAACATTC CGTCGCAGCA AGTGAAGGCC GGCGACGTGG TTGCGATCCG TGAAAAGGCG AAGAAGCAAG CGCGTATCGT CGAAGCGCTG TCGCTGGCCG AGCAAGGCGG CATGCCGAGC TGGGTTGCGG TCGATGCGAA GAAGTTCGAA GGCACCTTCA AGCAAGTGCC GGAGCGCGCC GACATCGCGG GCGACATCAA CGAAAGCCTG ATCGTCGAAT TGTATTCGCG TTAA
|
Protein sequence | MARYIGPKAK LSRREGTDLF LKSARRSLAD KCKLDSKPGQ HGRISGARTS DYGTQLREKQ KVKRIYGVLE RQFRRYFAEA DRRKGNTGET LLQLLESRLD NVVYRMGFGS TRAEARQLVS HKAITVNGIV ANIPSQQVKA GDVVAIREKA KKQARIVEAL SLAEQGGMPS WVAVDAKKFE GTFKQVPERA DIAGDINESL IVELYSR
|
| |