| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BMA10247_3469 |
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| Symbol | rpoB |
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| ID | 4892968 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia mallei NCTC 10247 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009080 |
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| Strand | + |
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| Start bp | 3413012 |
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| End bp | 3417118 |
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| Gene Length | 4107 bp |
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| Protein Length | 1368 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640152116 |
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| Product | DNA-directed RNA polymerase subunit beta |
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| Protein accession | YP_001082981 |
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| Protein GI | 126449748 |
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| COG category | [K] Transcription |
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| COG ID | [COG0085] DNA-directed RNA polymerase, beta subunit/140 kD subunit |
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| TIGRFAM ID | [TIGR02013] DNA-directed RNA polymerase, beta subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.565589 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAATATT CCTTCACCGA GAAGAAGCGC ATTCGCAAGA GTTTCGCGAA GCGTTCCATC
GTTCACCAAG TGCCTTTCCT GCTGGCCACC CAGCTTGAAT CATTCAGCAC ATTTCTGCAA
GCCGATGTGC CCACCGCGCA ACGCAAGTCC GAGGGGTTGC AGGCCGCCTT CACGTCGGTG
TTTCCCATCG TCTCGCATAA CGGCTTCGCT CGTCTCGAGT TCGTGAGCTA TGCGTTGTCG
TCGCCGGCGT TCAACATCAA GGAATGTCAG CAGCGCGGCC TGACCTACTG CTCGGCGCTG
CGCGCGAAGG TGCGCCTCGT GCTCCTCGAC AAGGAGTCGC CGAGCAAGCC CGTCGTCAAG
GAAGTGAAGG AACAGGAAGT GTACATGGGC GAGATTCCGC TCATGACGCC GACCGGTTCG
TTCGTCATCA ACGGCACCGA GCGCGTGATC GTGTCGCAGT TGCACCGTTC GCCCGGCGTG
TTCTTCGAGC ACGACAAGGG CAAGACGCAC AGCTCGGGCA AGCTGCTGTT CTCCGCGCGG
ATCATTCCGT ACCGCGGCTC GTGGCTCGAC TTCGAATTCG ATCCGAAGGA CGTGCTGTAT
TTCCGCGTCG ACCGCCGCCG CAAGATGCCG GTCACGATCC TGCTGAAGGC GATCGGCCTC
ACGCCTGAGC AGATCCTCGC GAACTTCTTC GTCTTCGACA ACTTCACGCT GATGGACGAA
GGCGCGCAGA TGGAGTTCGT GCCCGAGCGT CTGCGCGGCG AAGTCGCGCG CTTCGACATC
ACCGATCGCG AAGGCAAGGT CATCGTCCAG AAGGACAAGC GGATCAACGC GAAGCACATT
CGCGATCTCG AAGCCGCGAA GACCAAGTAC ATCTCGGTGC CCGAAGACTA TCTGCTCGGC
CGCGTGCTGG CGAAGAACGT CGTCGACGGC GACACGGGTG AAGTGATCGC GAACGCGAAC
GACGAGATCA CCGAAGGCGT GCTCGAGAAG CTGCGCGAAG CGAAGATCAA GGAAATCCAG
ACGCTCTACA CGAACGATCT GGACCAGGGC CCGTACATCT CGTCGACGCT GCGCGTGGAC
GAAACCGTCG ACAAGACGGC CGCGCGCATC GCGATCTACC GGATGATGCG CCCGGGCGAG
CCGCCGACGG AAGAAGCCGT CGAGGCGCTC TTCAACCGCC TGTTCTACAG CGAAGACGCG
TACGACCTGT CGAAGGTCGG CCGCATGAAG TTCAACCGCC GCGTCGGCCG TGACGAGATC
ACGGGCCCGA TGACGCTGCA GGACGACGAC ATCCTCGCGA CGATCAAGAT CCTCGTCGAG
CTGCGCAACG GCAAGGGCGA AGTCGACGAC ATCGACCACC TCGGCAACCG TCGCGTGCGC
TGCGTCGGCG AACTGGCGGA AAACCAGTTC CGCGCGGGCC TGGTGCGCGT CGAGCGCGCG
GTGAAGGAAC GTCTCGGCCA GGCCGAGAGC GAAAACCTGA TGCCGCACGA CCTGATCAAC
TCGAAGCCGA TTTCGTCGGC GATTCGCGAG TTCTTCGGTT CGTCGCAGCT GTCGCAGTTC
ATGGACCAGA CCAACCCGCT GTCGGAAATC ACGCACAAGC GCCGCGTGTC CGCACTGGGC
CCGGGCGGTC TCACGCGCGA GCGCGCCGGC TTCGAAGTCC GCGACGTGCA CCCGACCCAC
TACGGCCGCG TGTGTCCGAT CGAGACGCCG GAAGGTCCGA ACATCGGCCT CATCAACTCG
CTCGCACTGT ACGCGCACCT GAACGAATAC GGCTTCCTCG AGACGCCGTA CCGCAAGGTC
GTCGACAGCA AGGTGACCGA CCAGATCGAC TATCTGTCGG CGATCGAGGA AGGCCGCTAC
ATGATCGCGC AGGCGAACGC CGCGATCGGC GACGACGGCG CGCTCGTCGA CGAACTGGTG
TCGTCGCGCG AAGCCGGCGA AACGATGATG GTCACGCCGG ACCGCATCCA GTACATGGAC
GTCGCGCCGT CGCAGATCGT GTCGGTGGCA GCCTCGCTGA TTCCGTTCCT CGAGCACGAT
GACGCGAACC GCGCGCTGAT GGGCTCGAAC ATGCAGCGTC AGGCCGTGCC GTGTCTGCGT
CCGGAGAAGC CCGTCGTCGG TACCGGCATC GAGCGCACCG TGGCGGTCGA CTCGGGCACG
ACGGTGCAGG CGCTGCGCGG CGGCGTCGTC GATTACGTCG ACGCGGGCCG TATCGTCATT
CGCGTGAACG ATGACGAAGC GGTCGCGGGC GAAGTCGGCG TCGACATCTA CAACCTGATC
AAGTACACGC GTTCGAACCA GAACACGAAC ATCAATCAGC GTCCGATCGT GAAGATGGGC
GACAAGGTCT CGCGCGGCGA CGTGCTGGCC GATGGCGCAT CGACCGACCT GGGCGAGCTC
GCGCTCGGCC AGAACATGCT GATCGCGTTC ATGCCGTGGA ACGGCTACAA CTTCGAGGAT
TCGATCCTGA TCTCGGAGCG CGTCGTCGCG GACGATCGCT ACACGTCGAT CCACATCGAA
GAGCTGAACG TCGTCGCACG CGACACGAAG CTCGGGCCGG AAGAAATCAC GCGCGACATC
TCGAACCTCG CGGAAGTCCA GCTCGGCCGT CTCGACGAAT CGGGCATCGT GTACATCGGT
GCGGAAGTCG AAGCGGGCGA CGTGCTGGTC GGCAAGGTCA CGCCGAAGGG CGAGACCCAG
CTGACGCCGG AAGAGAAGCT GCTGCGCGCG ATCTTCGGCG AGAAGGCGTC GGACGTGAAG
GACACGTCGC TGCGCGTGCC GTCGGGCATG AGCGGCACCG TGATCGACGT TCAGGTGTTC
ACGCGCGAAG GTATCCAGCG TGACAAGCGC GCGCAACAGA TCATCGACGA CGAACTGAAG
CGCTACCGTC TGGACTTGAA CGACCAGCTG CGCATCGTCG AAGGCGACGC ATTCCAGCGT
CTCGCGCGCA TGCTCGTCGG CAAGGTCGCG AACGGCGGTC CGAAGAAGCT CGCGAAGGGC
ACGAAGATCG ACCAGGCGTA CCTGGAGGAT CTCGACCACT ACCACTGGTT CGACATCCGC
CTCGCGGACG ACGAAGCGGC CGTGCAGCTC GAAGCGATCA AGAACTCGAT CGAAGAGAAG
CGCCACCAGT TCGACCTCGC GTTCGAAGAG AAGCGCAAGA AGCTCACGCA AGGCGACGAA
CTGCCGCCGG GCGTGCTGAA GATGGTCAAG GTGTACCTCG CGGTGAAGCG CCGCCTACAG
CCTGGCGACA AGATGGCGGG CCGTCACGGT AACAAGGGTG TCGTGTCGAA GATCGTTCCG
GTCGAAGACA TGCCGTACAT GGCCGACGGC CGTCCGGCCG ACGTCGTGCT GAATCCGCTC
GGCGTGCCGT CGCGGATGAA CGTGGGGCAG GTCCTGGAAG TGCACCTCGG CTGGGCCGCG
AAGGGCCTCG GCTGGCGTAT CGGCGAGATG CTCGCGCGTC AGACGAAGAT CGAAGAGCTG
CGTGTGTTCC TGACGAAGAT CTACAACGAG TCGGGCCGTG CGGAAGACCT CGAGAGCTTC
AGCGACGACG AAATCCTCGA ACTCGCGAAG AATCTGCGCG AAGGCGTGCC GTTCGCGACG
CCGGTGTTCG ACGGCGCGAC CGAGGAAGAA ATGTCGAAGA TGCTCGACCT CGCGTTCCCG
GACGACATCG CCGAACAGCT CGACATGAAT CCGTCGAAGA ACCAGGTGCG CCTGTACGAC
GGCCGCACGG GCGAGCCGTT CGAGCGCCGC GTGACGGTGG GCTACATGCA CTACCTGAAG
CTGCACCACT TGGTCGACGA CAAGATGCAC GCGCGTTCGA CGGGCCCGTA CTCGCTCGTC
ACGCAGCAGC CGCTCGGCGG CAAGGCGCAG TTCGGCGGCC AGCGCTTCGG TGAAATGGAA
GTGTGGGCGC TCGAAGCGTA TGGCGCTTCG TACGTGCTGC AGGAAATGCT GACGGTGAAG
TCGGACGACG TGACCGGCCG GACCAAGGTT TATGAAAACC TGGTCAAGGG CGACCATGTC
ATCGACGCCG GCATGCCCGA GTCGTTCAAC GTGTTGGTGA AGGAAATCCG GTCGCTCGGT
ATCGACATCG ACCTGGACCG GAACTAA
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| Protein sequence | MQYSFTEKKR IRKSFAKRSI VHQVPFLLAT QLESFSTFLQ ADVPTAQRKS EGLQAAFTSV
FPIVSHNGFA RLEFVSYALS SPAFNIKECQ QRGLTYCSAL RAKVRLVLLD KESPSKPVVK
EVKEQEVYMG EIPLMTPTGS FVINGTERVI VSQLHRSPGV FFEHDKGKTH SSGKLLFSAR
IIPYRGSWLD FEFDPKDVLY FRVDRRRKMP VTILLKAIGL TPEQILANFF VFDNFTLMDE
GAQMEFVPER LRGEVARFDI TDREGKVIVQ KDKRINAKHI RDLEAAKTKY ISVPEDYLLG
RVLAKNVVDG DTGEVIANAN DEITEGVLEK LREAKIKEIQ TLYTNDLDQG PYISSTLRVD
ETVDKTAARI AIYRMMRPGE PPTEEAVEAL FNRLFYSEDA YDLSKVGRMK FNRRVGRDEI
TGPMTLQDDD ILATIKILVE LRNGKGEVDD IDHLGNRRVR CVGELAENQF RAGLVRVERA
VKERLGQAES ENLMPHDLIN SKPISSAIRE FFGSSQLSQF MDQTNPLSEI THKRRVSALG
PGGLTRERAG FEVRDVHPTH YGRVCPIETP EGPNIGLINS LALYAHLNEY GFLETPYRKV
VDSKVTDQID YLSAIEEGRY MIAQANAAIG DDGALVDELV SSREAGETMM VTPDRIQYMD
VAPSQIVSVA ASLIPFLEHD DANRALMGSN MQRQAVPCLR PEKPVVGTGI ERTVAVDSGT
TVQALRGGVV DYVDAGRIVI RVNDDEAVAG EVGVDIYNLI KYTRSNQNTN INQRPIVKMG
DKVSRGDVLA DGASTDLGEL ALGQNMLIAF MPWNGYNFED SILISERVVA DDRYTSIHIE
ELNVVARDTK LGPEEITRDI SNLAEVQLGR LDESGIVYIG AEVEAGDVLV GKVTPKGETQ
LTPEEKLLRA IFGEKASDVK DTSLRVPSGM SGTVIDVQVF TREGIQRDKR AQQIIDDELK
RYRLDLNDQL RIVEGDAFQR LARMLVGKVA NGGPKKLAKG TKIDQAYLED LDHYHWFDIR
LADDEAAVQL EAIKNSIEEK RHQFDLAFEE KRKKLTQGDE LPPGVLKMVK VYLAVKRRLQ
PGDKMAGRHG NKGVVSKIVP VEDMPYMADG RPADVVLNPL GVPSRMNVGQ VLEVHLGWAA
KGLGWRIGEM LARQTKIEEL RVFLTKIYNE SGRAEDLESF SDDEILELAK NLREGVPFAT
PVFDGATEEE MSKMLDLAFP DDIAEQLDMN PSKNQVRLYD GRTGEPFERR VTVGYMHYLK
LHHLVDDKMH ARSTGPYSLV TQQPLGGKAQ FGGQRFGEME VWALEAYGAS YVLQEMLTVK
SDDVTGRTKV YENLVKGDHV IDAGMPESFN VLVKEIRSLG IDIDLDRN
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