Gene BMA10247_3250 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBMA10247_3250 
SymbolpilC 
ID4894900 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia mallei NCTC 10247 
KingdomBacteria 
Replicon accessionNC_009080 
Strand
Start bp3216101 
End bp3217318 
Gene Length1218 bp 
Protein Length405 aa 
Translation table11 
GC content72% 
IMG OID640151897 
Producttype IV pilus biogenesis protein PilC 
Protein accessionYP_001082767 
Protein GI126449792 
COG category[N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG1459] Type II secretory pathway, component PulF 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGTACAC GCGGACCGGC TTCGCCGATC GAGTCCCGAT ACCGTTGGGC GGGCGTGACG 
ATCGACGGCG CGCGGCGGCG CGGCATGTTG ATCGCCGTCG ATCCGTCCGC TGCGCGCGCG
GCGCTCAAGC GCACGGGCGT CACCGTGCTG CGCCTCGAAG CGCGCGGCCG GGCGCCGCAG
CCCGCCGCAC GGGCGAGCGA AGTCACCCGT TTCGCGCGGC AGCTCGCGGG ACTCCTGCAC
GCGGGGCTCG CGCTTGCGCC GTCGCTCGAA CTGCTCGCGC AAGCGACGCA GCGAAGCGAA
ATGCCCCGCG TCGCGGCGGG CCTCGCGCGC GAGATCGTGG CGGGACGGCA GTTCTCCGCC
GCGCTGCGCC GCTACCCGCG CCAGTTCGAT CCGTTTTTCT GTCAACTGGT CGCAGTCGGC
GAAACGGCGG GAGCGCTCGC CGCGGTGCTC ACACGGCTCG CCGACGATCG CGAGCGTGCA
GCCGCGCAAT ATGCGCGCGT CAAAGGCGCG CTCGCTTACC CAGCCACCGT GCTGCTGTTC
GCGCTCGCGA TCACCGCCGC ATTGCTGGTC TGGGTGGTGC CCACGTTCGA ACAGATCTTC
GCGGGCTTCG GCGCCCCGCT GCCTGCGCCG ACCCGTTTCG TCCTCGCGCT GTCGGCCGGC
GTGACGCGCT GGAGCGCGCC TGCCGCCGCG GCCACGCTAT TCGCCTGCGT TGCCGTTCGC
CATACGGCGC GCCGTTCCGC AGCCGCGCGC GTCGCGCTCG CACGGACGCT GCTGCGCGCG
CCGTTCGTCG GGCCGCTCGT GCAGACGCTC GCCGCCGCCC GATGGAGCCG CGCGCTCGGC
ACGTTGCTCG CCGCCGGCAC GCCGCTCACC GACGCATTCG CGGCGCTGTC GAACGCGACC
GGCAACCCGC GTTTCGATCT CGCGACAGCC GGCATCGCCG CGCGGGTGCT GCATGGCGAA
CGGCTCGCCC GCGCGATGCG CGCCGAAGGC TGCTTCCCTG ACGATCTCGT CCAGCCGATC
GCCGTCGCCG AGGAATCGGG CACGCTGGAC ACAATGCTCA TCGACGCCGC GACACTCTGC
GATCGCCGCG TCGACGAACG GATCAGCGCG CTCGCGAACC TGTGCGAACC CGTCGTGATC
GTCGTGCTGG GCGCGCTGAT CGGCGCGCTC GTCGTCGCGA TGTACTTGCC GATCGTCCAG
CTCGGCAACG TGGTGTAG
 
Protein sequence
MSTRGPASPI ESRYRWAGVT IDGARRRGML IAVDPSAARA ALKRTGVTVL RLEARGRAPQ 
PAARASEVTR FARQLAGLLH AGLALAPSLE LLAQATQRSE MPRVAAGLAR EIVAGRQFSA
ALRRYPRQFD PFFCQLVAVG ETAGALAAVL TRLADDRERA AAQYARVKGA LAYPATVLLF
ALAITAALLV WVVPTFEQIF AGFGAPLPAP TRFVLALSAG VTRWSAPAAA ATLFACVAVR
HTARRSAAAR VALARTLLRA PFVGPLVQTL AAARWSRALG TLLAAGTPLT DAFAALSNAT
GNPRFDLATA GIAARVLHGE RLARAMRAEG CFPDDLVQPI AVAEESGTLD TMLIDAATLC
DRRVDERISA LANLCEPVVI VVLGALIGAL VVAMYLPIVQ LGNVV