| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BMA10247_3094 |
|---|
| Symbol | |
|---|
| ID | 4894046 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia mallei NCTC 10247 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009080 |
|---|
| Strand | - |
|---|
| Start bp | 3056332 |
|---|
| End bp | 3057090 |
|---|
| Gene Length | 759 bp |
|---|
| Protein Length | 252 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 74% |
|---|
| IMG OID | 640151742 |
|---|
| Product | short chain dehydrogenase/reductase family oxidoreductase |
|---|
| Protein accession | YP_001082613 |
|---|
| Protein GI | 126448399 |
|---|
| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
|---|
| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.380527 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTTCTCCG AACGCTGCCT CGCAGGCGGC ACCTACCTCG TCACGGGCGC GTCGTCCGGC
ATCGGCCGCG CGGCGGCGAT CGCGATCGCG CAACTCGGCG GGCGGCTCGT CCTCGGCGGG
CGCGACCCGG CGCGCCTCGC CGACACGCTC GCCGCGCTGC CCGGCGACGG CCATGCATCG
CACGCGGCCG CGCTCGACGA CGCGGACGCG GCCGCCGACT GGGTCGGCGC GCTCGCCGAG
ACCCACGGCC CGCTCGCGGG CGTGTTCCAT GCGGCGGGCG TCGAGCTGAT CCGCCCGGCG
CGCATGACGG CGCAGGCGCA ACTCGAGCAG GTATTCGGCG CGAGTCTGTA CGCCGCGTTC
GGCATCGCGC GCGCCGCCGC GAAGAAGAAC GTCATCGCGG ACGGCGGCTC GGTCGTCTAC
ATGTCCTCCG TCGCCGGCTC GACCGGGCAG GTCGGCATGA CCGCCTATTC GGCGGCGAAG
GCGGGCATCG AAGGGCTCGT GCGTTCGCTC GCATGCGAAC TCGCGCCGCG CCGGATTCGT
GCCAATGCGA TCGCCGCGGG CGCGGTCAAG ACGGAAATGC ATGCGCGCCT GACGCGCGGC
ACGCCCGAGG ACGCGCTCGC CGCGTACGAG GCGAGCCATC TGCTCGGCTT CGGCGAGCCC
GGCGACGTCG CGGCCGCGGC GATCTTTCTG TTGAGCGGCG CGAGCCGCTG GATTACCGGC
ACGTCGCTCG TCGTCGACGG CGGCTACAAG GTGCGCTGA
|
|---|
| Protein sequence | MFSERCLAGG TYLVTGASSG IGRAAAIAIA QLGGRLVLGG RDPARLADTL AALPGDGHAS
HAAALDDADA AADWVGALAE THGPLAGVFH AAGVELIRPA RMTAQAQLEQ VFGASLYAAF
GIARAAAKKN VIADGGSVVY MSSVAGSTGQ VGMTAYSAAK AGIEGLVRSL ACELAPRRIR
ANAIAAGAVK TEMHARLTRG TPEDALAAYE ASHLLGFGEP GDVAAAAIFL LSGASRWITG
TSLVVDGGYK VR
|
|---|
| |