Gene BMA10247_2674 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBMA10247_2674 
Symbol 
ID4894361 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia mallei NCTC 10247 
KingdomBacteria 
Replicon accessionNC_009080 
Strand
Start bp2638265 
End bp2639881 
Gene Length1617 bp 
Protein Length538 aa 
Translation table11 
GC content74% 
IMG OID640151325 
ProductRND efflux system outer membrane lipoprotein 
Protein accessionYP_001082199 
Protein GI126449615 
COG category[M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG1538] Outer membrane protein 
TIGRFAM ID[TIGR01845] efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.831333 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCGCAAG TCCCACATCC GCGCGCGCGC CGCGCGTTGA GCGCCGCCGT CGCCGCGGCC 
ACCGCCGTGC TGCTCGCCGG CTGCGCGGTC GGGCCCGACT ATCACCGCCC CGACGCGGCG
ATTCCCGCCG CGTACAAGGA AGCGCCGCCC GGCTGGAAGC TCGCGCAGCC GGCCGACCGC
GCGGACCGCG GCCCGTGGTG GTCGATCTAC GACGATGCGC AACTGAATGC GCTGATCGAC
AAGCTCAACG CGTCGAACCA GACCGTCGCG CAATACGCGG CCGCGTACCG GCAGGCGCGC
GCGCTCGTCG CCGAGGCGCG CGCGTCGTAC TTTCCGACGC TCGGGCTGAC CGCGAGCGAA
TCGCGCGCGT CGAGCGCGCT GTCGTCGGGC ACCGCGTCGC GCGGCACGAC GCGCACGGTC
GGCAACACGT ACAGCGTCGG CCTCGATGCG TCGTGGGAGC CGGACCTGTG GGGCAAGGTG
AGTCGCACGG TCGGCGCGCA GAAGGCAGGA GAAGCGGCCG CGGCCGCCGA TCTCGCGAAC
GCGCGGCTGT CCGCGCAGGC GACGCTCGCG GAGACCTACT TCCAGCTGCG CGCCGCGGAC
GCGACGCAAA AGCTGCTCGA CGATACCGTC GAGTCGTACC GGAAATCGCT GCAGCTCACG
CAGAACCAGT ACGCGCAGGG CGTCGCCGCG CGCGCGGACG TGATCCAGGC GCAGACCCAG
CTCCAATCGG CGCAGGCCGC CGCGATCGAC AACGGCATCG CGCGCGCGCA GTACGAGCAC
GCGATCGCGA CGCTCGTCGG CGAGCCGGCG CCGACGTTCT CGCTGCCGCC GATGCCGCTC
ACGGCCGAGC CGCCCGCGAT GCCGATCGAC GTGCCGTCGG CGATCCTCGA GCGGCGGCCC
GACGTCGCCG CCGCCGAGCG GCGCGCGGCC GCCGCGAACG AGCAGATCGG CGTCGCGATC
GCCGCGTTCT TCCCGACGCT CACGCTGTCC GCATCGGGCG GCTTTCAGAG CTCGGTGTGG
TCGCAGCTGT TCACGCTGCC CGCACGCTTC TGGTCGGTCG GCCCGCAGCT CGCCGCGACG
CTGTTCGACG CGGGCCTGCG CGCCGCGCAG ACGGAAGCGG CGCGCGCGAC CTACGATCAG
GACGTCGCCG CGTACCGGGC GGCCGTGCTC TCCGCGTTCC AGGACGTCGA GGACAACCTC
GCGTCGCAGC GCATCCTCGA GCAGGAAATC GTCGTGCAGC GGCAGGCGGT CGAATCCGCG
CAGCACTCGC TCGACATCAC GCTCAACCAG TACAAGGCGG GCACCGTCGG CTATCTGAAC
GTGCTGACCG CGCAGACAAC CGCGTTCAGC GCGCGGCAGA AGCTCGCGGC CCTCTCCGGG
CAGCGGATGG TGTCGTCGGT CGGACTCGTG AAAGCGCTCG GCGGCGGATG GGACGGGTCG
CAGATCGCGC GCGAGACAGG CGGCATGCAG GCGCCCGCCG CGCCGGCCGG GGCGGCGGCG
CCGGCGGCCA TGCCGGCCGC GGCCGTTGCG CCGGCGGCAC GCCCGGCGGC CGTGGTCGCG
GCGGCCGGGC CCGATACGCA GGCTCGCCGG CCGCGCGCCA CGCCCGCCGC GCAATAG
 
Protein sequence
MPQVPHPRAR RALSAAVAAA TAVLLAGCAV GPDYHRPDAA IPAAYKEAPP GWKLAQPADR 
ADRGPWWSIY DDAQLNALID KLNASNQTVA QYAAAYRQAR ALVAEARASY FPTLGLTASE
SRASSALSSG TASRGTTRTV GNTYSVGLDA SWEPDLWGKV SRTVGAQKAG EAAAAADLAN
ARLSAQATLA ETYFQLRAAD ATQKLLDDTV ESYRKSLQLT QNQYAQGVAA RADVIQAQTQ
LQSAQAAAID NGIARAQYEH AIATLVGEPA PTFSLPPMPL TAEPPAMPID VPSAILERRP
DVAAAERRAA AANEQIGVAI AAFFPTLTLS ASGGFQSSVW SQLFTLPARF WSVGPQLAAT
LFDAGLRAAQ TEAARATYDQ DVAAYRAAVL SAFQDVEDNL ASQRILEQEI VVQRQAVESA
QHSLDITLNQ YKAGTVGYLN VLTAQTTAFS ARQKLAALSG QRMVSSVGLV KALGGGWDGS
QIARETGGMQ APAAPAGAAA PAAMPAAAVA PAARPAAVVA AAGPDTQARR PRATPAAQ