Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BMA10247_2674 |
Symbol | |
ID | 4894361 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia mallei NCTC 10247 |
Kingdom | Bacteria |
Replicon accession | NC_009080 |
Strand | - |
Start bp | 2638265 |
End bp | 2639881 |
Gene Length | 1617 bp |
Protein Length | 538 aa |
Translation table | 11 |
GC content | 74% |
IMG OID | 640151325 |
Product | RND efflux system outer membrane lipoprotein |
Protein accession | YP_001082199 |
Protein GI | 126449615 |
COG category | [M] Cell wall/membrane/envelope biogenesis [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG1538] Outer membrane protein |
TIGRFAM ID | [TIGR01845] efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.831333 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCCGCAAG TCCCACATCC GCGCGCGCGC CGCGCGTTGA GCGCCGCCGT CGCCGCGGCC ACCGCCGTGC TGCTCGCCGG CTGCGCGGTC GGGCCCGACT ATCACCGCCC CGACGCGGCG ATTCCCGCCG CGTACAAGGA AGCGCCGCCC GGCTGGAAGC TCGCGCAGCC GGCCGACCGC GCGGACCGCG GCCCGTGGTG GTCGATCTAC GACGATGCGC AACTGAATGC GCTGATCGAC AAGCTCAACG CGTCGAACCA GACCGTCGCG CAATACGCGG CCGCGTACCG GCAGGCGCGC GCGCTCGTCG CCGAGGCGCG CGCGTCGTAC TTTCCGACGC TCGGGCTGAC CGCGAGCGAA TCGCGCGCGT CGAGCGCGCT GTCGTCGGGC ACCGCGTCGC GCGGCACGAC GCGCACGGTC GGCAACACGT ACAGCGTCGG CCTCGATGCG TCGTGGGAGC CGGACCTGTG GGGCAAGGTG AGTCGCACGG TCGGCGCGCA GAAGGCAGGA GAAGCGGCCG CGGCCGCCGA TCTCGCGAAC GCGCGGCTGT CCGCGCAGGC GACGCTCGCG GAGACCTACT TCCAGCTGCG CGCCGCGGAC GCGACGCAAA AGCTGCTCGA CGATACCGTC GAGTCGTACC GGAAATCGCT GCAGCTCACG CAGAACCAGT ACGCGCAGGG CGTCGCCGCG CGCGCGGACG TGATCCAGGC GCAGACCCAG CTCCAATCGG CGCAGGCCGC CGCGATCGAC AACGGCATCG CGCGCGCGCA GTACGAGCAC GCGATCGCGA CGCTCGTCGG CGAGCCGGCG CCGACGTTCT CGCTGCCGCC GATGCCGCTC ACGGCCGAGC CGCCCGCGAT GCCGATCGAC GTGCCGTCGG CGATCCTCGA GCGGCGGCCC GACGTCGCCG CCGCCGAGCG GCGCGCGGCC GCCGCGAACG AGCAGATCGG CGTCGCGATC GCCGCGTTCT TCCCGACGCT CACGCTGTCC GCATCGGGCG GCTTTCAGAG CTCGGTGTGG TCGCAGCTGT TCACGCTGCC CGCACGCTTC TGGTCGGTCG GCCCGCAGCT CGCCGCGACG CTGTTCGACG CGGGCCTGCG CGCCGCGCAG ACGGAAGCGG CGCGCGCGAC CTACGATCAG GACGTCGCCG CGTACCGGGC GGCCGTGCTC TCCGCGTTCC AGGACGTCGA GGACAACCTC GCGTCGCAGC GCATCCTCGA GCAGGAAATC GTCGTGCAGC GGCAGGCGGT CGAATCCGCG CAGCACTCGC TCGACATCAC GCTCAACCAG TACAAGGCGG GCACCGTCGG CTATCTGAAC GTGCTGACCG CGCAGACAAC CGCGTTCAGC GCGCGGCAGA AGCTCGCGGC CCTCTCCGGG CAGCGGATGG TGTCGTCGGT CGGACTCGTG AAAGCGCTCG GCGGCGGATG GGACGGGTCG CAGATCGCGC GCGAGACAGG CGGCATGCAG GCGCCCGCCG CGCCGGCCGG GGCGGCGGCG CCGGCGGCCA TGCCGGCCGC GGCCGTTGCG CCGGCGGCAC GCCCGGCGGC CGTGGTCGCG GCGGCCGGGC CCGATACGCA GGCTCGCCGG CCGCGCGCCA CGCCCGCCGC GCAATAG
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Protein sequence | MPQVPHPRAR RALSAAVAAA TAVLLAGCAV GPDYHRPDAA IPAAYKEAPP GWKLAQPADR ADRGPWWSIY DDAQLNALID KLNASNQTVA QYAAAYRQAR ALVAEARASY FPTLGLTASE SRASSALSSG TASRGTTRTV GNTYSVGLDA SWEPDLWGKV SRTVGAQKAG EAAAAADLAN ARLSAQATLA ETYFQLRAAD ATQKLLDDTV ESYRKSLQLT QNQYAQGVAA RADVIQAQTQ LQSAQAAAID NGIARAQYEH AIATLVGEPA PTFSLPPMPL TAEPPAMPID VPSAILERRP DVAAAERRAA AANEQIGVAI AAFFPTLTLS ASGGFQSSVW SQLFTLPARF WSVGPQLAAT LFDAGLRAAQ TEAARATYDQ DVAAYRAAVL SAFQDVEDNL ASQRILEQEI VVQRQAVESA QHSLDITLNQ YKAGTVGYLN VLTAQTTAFS ARQKLAALSG QRMVSSVGLV KALGGGWDGS QIARETGGMQ APAAPAGAAA PAAMPAAAVA PAARPAAVVA AAGPDTQARR PRATPAAQ
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