Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BMA10247_2493 |
Symbol | |
ID | 4891620 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia mallei NCTC 10247 |
Kingdom | Bacteria |
Replicon accession | NC_009080 |
Strand | + |
Start bp | 2464122 |
End bp | 2466413 |
Gene Length | 2292 bp |
Protein Length | 763 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 640151145 |
Product | hypothetical protein |
Protein accession | YP_001082019 |
Protein GI | 126450626 |
COG category | [S] Function unknown |
COG ID | [COG1944] Uncharacterized conserved protein |
TIGRFAM ID | [TIGR00702] uncharacterized domain [TIGR03604] bacteriocin biosynthesis docking scaffold, SagD family |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGCTCGACG ACTTCTCGCG CGTGCTGCGT TTCAAGCCGC ATCTGCTGGT GCGCGACGCC GGTTCCGGCG CGCTGTATGT GGTGGACGAA TTCAGGCGCT CGGTGCTGCC GGGCGACGTG TTTCCCGCGA TCGCCGCGTG CATGCGCGAT CGCCTGACGA TCGCGCAGAC GTTCGCGGCG CTCGCCGCGC GGTTTTCTCA ATGGGAGGTG CTCGCCGCGC TCGATCAACT GGTGCGGCGC GGCTACGTGC GCGCCGATGC ACCCGGCGAG CGCGACGCCG AGCTTGCCTT CCATGAACGC GCGGGCGTCG ACGGCGATGC GGCGAGCGGC GTCGCGTCGC GGCTTACGGT CGCCGTCGAG GCGTTCGGCG TGGACCCGCG CGCGCAGCTC GACGCGTTCG CCGCATGCGG GATCGGCGTT GCGCCCGACG CGCCGCTGAC GGTCGCGCTC ACCGACGGCT ACGATCGCGC CGAATTGATC GTGGCCGCCG AACGCGCGGC GGCGCGCGGC GGCGCATTGC TCGTTGTCGT GGCCGATCGC GTGGAGCCGC TGATCGGCCC GTTGCTCGGC GCTGCGGCGG GCTTGGCGGC ATCGACGGCG CCGACGGCAC CGTCGACATC GCCCGCGCCG CAGGACGCCG CCGACGCGCC GCCCTGCATC GAATGCGTGC GCTACTGGAC GGCGCTGAAC CATCCCGTCG AGACGCTGCT CGCGCGCCTG CACGGCGGCG ACGCGGCGCG CCTGCCGCCC GCGCGCAGCC GTGCGAGCGC CGCCGCCGTC GCGGCCGTCG TCGCGTCGTT CGTCGAGCAG ATCGCGGTGA ACGCGCAGCG CCGCCGTCAT GCGGGCTCGC ATATCGTGTC GCTGCGCGTC GATACGCTGG CCACCGCCGC GCATCGCGTC GTCAGGCGGC CGCAATGTCC GCGCTGCGCT CACGCGGGAT GGATGCGCGA GCAGGCCGAG CGCCCGGTGA CGCTCGCGTC GGCGGATGCA GGCGCGCGCC GCGACGGCGG CTATCGGACG CTTGCCGCCG CCGAGCTATT CAAACGCTAC GGACATCTGA TTTCCCCGGT GAGCGGGCCG ATCGCCTATC TGCATCCGAT GCCGGGGCGC AACGCCGGCA TGCGGCACAT GTACGTCGCG GGCTACCTGG TGTGCCCGCC GAGCGCGCCG CGCGAGAACC GTTTCGACAA GCTGTGCTCG GGCAAGGGCG CGAGCGACGC GCAGGCGCGC GCCAGCGCGC TCGCCGAGGC GCTGGAGCGC TTCAGCGGCG TCTATCAGGG CGACGAGGCG GCGCTGCGCG GCAGTCTCGC GCAGTTGTCG GCACACGCGC CGCCGGGCAG CGGGCCGATC GACGTCAACG CGCTACAGCA GTACAGCGAT CGCCAGTTCG AGCGGCGCGA GCGCCACAAC GCGACGACCG ACGATCCGCG CAAGCAGGTG CCGCGGCGCT TCACGCGCGA CAGCGTGATC GACTGGACAC CCGCGTGGTC GATCGCGACG GGCGCGCGGC GGCTCGTGCC GCTCGCGTAC TGCTATGCGG AAACGCCCGC GTCGAGCGGC GCCGACTATT GCGTGCACAA CCCGAACGGC TGCGCGGCAG GCGCATGCAT CGAGGAAGCG ATCCTGCAGG GCCTGCTCGA GCTCGTCGAG CGCGACGCGG TGGCGATCTG GTGGTACAAC ATGCTGCGCC GGCCGGCCGT GGACATCGAG AGCTTCGGCG ATCCGTACTT CGACGCGCTC GCCGCCGACT ATGCGTCGCT CGGCTGGCGC TTGTGGGTGC TCGACATCAC GCACGACCTG CGCATTCCGG TGTTCGTCGC GCTCGCGCGC GAAACGGCGA CGGGGCGCTT CTCGATCGGC TTCGGCTGCC ATCCGGACAG CCGGATCGCG CTGCAGCGCG CTCTCACCGA AGTGAATCAA CTGCTCGACG TCGGCGCGTC GGCGCCGCCG CCGTGGGACG TCGACAAGCT GCCGGACGAC GCGTTTCTTC ATCCGGATCC CGCGCTGCCG CCGGTGCGCG CGCCGGCGCG CGCACCGCAC GGCCGCTGCG ATCTGAAGCG TGACATCGAG GATTGCGTCG CGCGCTTGGC CGCGGCGGGC ATCGATACGC TCGTCGTCGA CAAGACGCGG CCCGACATCG GCCTGCCGGT CGTGCAGGTG ATCGCACCCG GCCTGTGTCA TTTCTGGCCG CGCTTCGGCG CGCCGCGACT GTATTCGGTG CCCGTCGCGC AGCGCTGGCG CGAGCGGCCG CGCGACGAGG ACGCGCTCAA TCGCGCGCTG CTGTTCCTGT AG
|
Protein sequence | MLDDFSRVLR FKPHLLVRDA GSGALYVVDE FRRSVLPGDV FPAIAACMRD RLTIAQTFAA LAARFSQWEV LAALDQLVRR GYVRADAPGE RDAELAFHER AGVDGDAASG VASRLTVAVE AFGVDPRAQL DAFAACGIGV APDAPLTVAL TDGYDRAELI VAAERAAARG GALLVVVADR VEPLIGPLLG AAAGLAASTA PTAPSTSPAP QDAADAPPCI ECVRYWTALN HPVETLLARL HGGDAARLPP ARSRASAAAV AAVVASFVEQ IAVNAQRRRH AGSHIVSLRV DTLATAAHRV VRRPQCPRCA HAGWMREQAE RPVTLASADA GARRDGGYRT LAAAELFKRY GHLISPVSGP IAYLHPMPGR NAGMRHMYVA GYLVCPPSAP RENRFDKLCS GKGASDAQAR ASALAEALER FSGVYQGDEA ALRGSLAQLS AHAPPGSGPI DVNALQQYSD RQFERRERHN ATTDDPRKQV PRRFTRDSVI DWTPAWSIAT GARRLVPLAY CYAETPASSG ADYCVHNPNG CAAGACIEEA ILQGLLELVE RDAVAIWWYN MLRRPAVDIE SFGDPYFDAL AADYASLGWR LWVLDITHDL RIPVFVALAR ETATGRFSIG FGCHPDSRIA LQRALTEVNQ LLDVGASAPP PWDVDKLPDD AFLHPDPALP PVRAPARAPH GRCDLKRDIE DCVARLAAAG IDTLVVDKTR PDIGLPVVQV IAPGLCHFWP RFGAPRLYSV PVAQRWRERP RDEDALNRAL LFL
|
| |